G1873030


Basic Information

Item Value
gene id G1873030
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 46941286 ~ 46942457 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2142791
ttactcagctgggccaggggcgctttaattaggtcaggtggaaatgtccgacagatctcaactccataaaaggaggaaattgccatcgcctgatctcgctgctttctcttccttaactccatctgatccagaagttctgtgcgtccatgaatccacactactcagtaaatataccactttatggttaaaggaattcctgcctcagtctcatccattcctctgtcacctgacacgtgaccacctgttcaccttcactgtcagtcatcttacctgtccagctacccacacagattccactaatctttcaatGGTCCTTCGAGCTGGATGATGACTGAACCAAAGACAGGTGAAAAGGAAATGGAGGCGGAGAGGGAAGAATTGTCTCCACtggaaggaagaagagaggaggagagagcaggagctAAGCCTAAAGCAACAAAGGCTTCATCCTCaaccaccagcagcaccagaagaACCAGGCAAGCACCTGGTTATCCTAAGGATTATGTGGTCGAGTTTCCGACATCAAAGGGCAAGCCCACCAGAGCTCAAAGAGTTGATGGATCAACTATACGTTTCAGCCATCAACCATCTCCTTTGAGCCAAGGACCGGAAACTGCTTTGGAGCAAGAAAGTGGTCTACATGAAGAACCTATGGAGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2142791 True 663 TUCP 0.48 2 46941286 46942457

Neighbor

gene id symbol gene type direction distance location
LOC110502858 LOC106608924 coding downstream 6383 46911510 ~ 46934903 (-)
LOC110502855 LOC106608961 coding downstream 58778 46875863 ~ 46882508 (-)
tha1 LOC106608997 coding downstream 252929 46685639 ~ 46688357 (-)
LOC110502851 eef2k coding downstream 266914 46649321 ~ 46674372 (-)
trnal-aag-68 NA coding downstream 309432 46631773 ~ 46631854 (-)
chadlb LOC106609330 coding upstream 49917 46992374 ~ 47001698 (-)
LOC110502866 LOC106609338 coding upstream 59543 47002000 ~ 47008330 (-)
LOC110502870 PHF5A coding upstream 125440 47067897 ~ 47079813 (-)
LOC110502873 LOC106609366 coding upstream 217315 47159772 ~ 47174198 (-)
LOC110502875 LOC106609407 coding upstream 232568 47175025 ~ 47187302 (-)
G1873029 LOC106600668 non-coding downstream 2378 46938539 ~ 46938908 (-)
G1873028 LOC106600668 non-coding downstream 2947 46938115 ~ 46938339 (-)
G1873011 NA non-coding downstream 49306 46891638 ~ 46891980 (-)
G1872984 NA non-coding downstream 67391 46871279 ~ 46873895 (-)
G1873032 NA non-coding upstream 921 46943378 ~ 46943591 (-)
G1873036 NA non-coding upstream 6172 46948629 ~ 46950157 (-)
G1873040 NA non-coding upstream 14686 46957143 ~ 46957416 (-)
G1873044 NA non-coding upstream 20550 46963007 ~ 46963240 (-)
G1873079 NA non-coding upstream 79283 47021740 ~ 47022513 (-)
G1872556 NA other downstream 143636 46797235 ~ 46797650 (-)
G1872165 NA other downstream 911479 46027920 ~ 46029807 (-)
G1868940 LOC106611807 other downstream 3439853 43486868 ~ 43501433 (-)
G1868010 NA other downstream 3963142 42915406 ~ 42978144 (-)
srsf2a LOC106612293 other downstream 6756074 40179809 ~ 40185223 (-)
G1873043 NA other upstream 18165 46960622 ~ 46961653 (-)
G1873183 NA other upstream 315136 47257593 ~ 47312395 (-)
LOC110502901 NA other upstream 1578222 48520679 ~ 48528302 (-)
LOC110503133 LOC106609742 other upstream 1695534 48637596 ~ 48641914 (-)

Expression


Co-expression Network