G1873036


Basic Information

Item Value
gene id G1873036
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 46948629 ~ 46950157 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2142800
tgtttccttactttttcaaagtcactgtgcatttgcaatatgtttcaatgggcaggtaccatcacaaatttgtcatgctcaaaattcaagctttactttgctcaaactatacctttgtcatcttgtgatctaaaatatgcaactggttacccaaaaaatttgttgatgtttttttgtttatgtttccttactttttcaaagtcactgtgcatttgcaatatgtttcaatgggcaggtaccatcacgaatttgtcatgctcaaaattttttagatgtatttttttttgtttccttactttttcaaagtcactgtgcatttgcaatatgttttaatgggcaggtaccatcacgaatttgtcatgctcaaaattcaagctttactttgctcaaactatacctttgtcatcttgtgatctaaaatatgcaactggttacccaaaacatttgttgatgtttttttgtttatgtttccttactttttcaaagtcactgtgcatttgcaatatgtttcaatgggcaggtaccatcacgaatttgtcatgctcaaaattttttagatttattttttt
>TU2142801
tgtttccttactttttcaaagtcactgtgcatttgcaatatgtttcaatgggcaggtaccatcacaaatttgtcatgctcaaaattcaagctttactttgctcaaactatacctttgtcatcttgtgatctaaaatatgcaactggttacccaaaaaatttgttgatgtttttttgtttatgtttccttactttttcaaagtcactgtgcatttgcaatatgtttcaatgggcaggtaccatcacgaatttgtcatgctcaaaattttttagatgtatttttttttgtttccttactttttcaaagtcactgtgcatttgcaatatgttttaatgggcaggtaccatcacgaatttgtcatgctcaaaattcaagctttactttgctcaaactatacctttgtcatcttgtgatctaaaatatgcaactggttacccaaaacatttgttgatgtttttttgtttatgtttccttactttttcaaagtcactgtgcatttgcaatatgtttcaatgggcaggtaccatcacgaatttgtcatgctcaaaattttttagatgtatttttttttgtttccttactttttcaaagtcactgtgcatttgcaatatgttttaatgggcaggtaccatcacgaatttgtcatgctcaaaattcaagctttactttgctcaaactatacctttgtcatcttgtgatctaaaatatgcaactggttacccaaaaaatttgttgatgtttttttgtttatgtttccttactttttcaaagtcactgtgcatttgcaatatgtttcaatgggcaggtaccatcacgaatttgtcatgctcaaaattttttagatttattttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2142800 False 569 lncRNA 0.32 3 46948629 46950157
TU2142801 True 854 lncRNA 0.32 3 46948629 46950157

Neighbor

gene id symbol gene type direction distance location
LOC110502858 LOC106608924 coding downstream 13726 46911510 ~ 46934903 (-)
LOC110502855 LOC106608961 coding downstream 66121 46875863 ~ 46882508 (-)
tha1 LOC106608997 coding downstream 260272 46685639 ~ 46688357 (-)
LOC110502851 eef2k coding downstream 274257 46649321 ~ 46674372 (-)
trnal-aag-68 NA coding downstream 316775 46631773 ~ 46631854 (-)
chadlb LOC106609330 coding upstream 42217 46992374 ~ 47001698 (-)
LOC110502866 LOC106609338 coding upstream 51843 47002000 ~ 47008330 (-)
LOC110502870 PHF5A coding upstream 117740 47067897 ~ 47079813 (-)
LOC110502873 LOC106609366 coding upstream 209615 47159772 ~ 47174198 (-)
LOC110502875 LOC106609407 coding upstream 224868 47175025 ~ 47187302 (-)
G1873032 NA non-coding downstream 5038 46943378 ~ 46943591 (-)
G1873029 LOC106600668 non-coding downstream 9721 46938539 ~ 46938908 (-)
G1873028 LOC106600668 non-coding downstream 10290 46938115 ~ 46938339 (-)
G1873011 NA non-coding downstream 56649 46891638 ~ 46891980 (-)
G1873040 NA non-coding upstream 6986 46957143 ~ 46957416 (-)
G1873044 NA non-coding upstream 12850 46963007 ~ 46963240 (-)
G1873079 NA non-coding upstream 71583 47021740 ~ 47022513 (-)
G1873083 NA non-coding upstream 82831 47032988 ~ 47037069 (-)
G1873030 NA other downstream 6172 46941286 ~ 46942457 (-)
G1872556 NA other downstream 150979 46797235 ~ 46797650 (-)
G1872165 NA other downstream 918822 46027920 ~ 46029807 (-)
G1868940 LOC106611807 other downstream 3447196 43486868 ~ 43501433 (-)
G1868010 NA other downstream 3970485 42915406 ~ 42978144 (-)
G1873043 NA other upstream 10465 46960622 ~ 46961653 (-)
G1873183 NA other upstream 307436 47257593 ~ 47312395 (-)
LOC110502901 NA other upstream 1570522 48520679 ~ 48528302 (-)
LOC110503133 LOC106609742 other upstream 1687834 48637596 ~ 48641914 (-)

Expression


Co-expression Network