Gene
RNA
| Item | Value |
|---|---|
| gene id | G1873468 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 47720352 ~ 47720689 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: transcription and mRNA export factor ENY2-like |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2143345 | True | 338 | lncRNA | 0.37 | 1 | 47720352 | 47720689 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502889 | snx29 | coding | upstream | 26133 | 47518622 ~ 47694219 (+) |
| rsl1d1 | LOC106609534 | coding | upstream | 214016 | 47501608 ~ 47506336 (+) |
| LOC118943946 | NA | coding | upstream | 216097 | 47504131 ~ 47504255 (+) |
| LOC118943950 | NA | coding | upstream | 216484 | 47503741 ~ 47503868 (+) |
| LOC118943945 | NA | coding | upstream | 217347 | 47502878 ~ 47503005 (+) |
| LOC110502891 | LOC106609556 | coding | downstream | 173646 | 47894335 ~ 47933015 (+) |
| LOC110502893 | LOC106609573 | coding | downstream | 286487 | 48007176 ~ 48021129 (+) |
| LOC110502895 | LOC106609599 | coding | downstream | 364049 | 48084738 ~ 48089012 (+) |
| LOC100135792 | LOC100135792 | coding | downstream | 621718 | 48342407 ~ 48343186 (+) |
| LOC110502898 | LOC106609288 | coding | downstream | 667311 | 48388000 ~ 48440260 (+) |
| G1872843 | NA | non-coding | upstream | 294472 | 47408169 ~ 47425880 (+) |
| G1872844 | NA | non-coding | upstream | 296797 | 47423003 ~ 47423555 (+) |
| G1872842 | NA | non-coding | upstream | 314532 | 47404470 ~ 47405820 (+) |
| LOC110503127 | LOC106609422 | non-coding | upstream | 404738 | 47312009 ~ 47374126 (+) |
| G1872783 | NA | non-coding | upstream | 465194 | 47254873 ~ 47255158 (+) |
| G1873506 | NA | non-coding | downstream | 29997 | 47750686 ~ 47750978 (+) |
| G1873545 | NA | non-coding | downstream | 60467 | 47781156 ~ 47781474 (+) |
| G1873546 | NA | non-coding | downstream | 61466 | 47782155 ~ 47782369 (+) |
| G1873551 | NA | non-coding | downstream | 64656 | 47785345 ~ 47787367 (+) |
| G1873557 | NA | non-coding | downstream | 70277 | 47790966 ~ 47791497 (+) |
| LOC110502887 | NA | other | upstream | 249549 | 47467771 ~ 47470803 (+) |
| LOC110502882 | csnk1d | other | upstream | 332661 | 47374444 ~ 47435736 (+) |
| LOC110502861 | LOC106608955 | other | upstream | 816780 | 46896695 ~ 46903585 (+) |
| G1871170 | NA | other | upstream | 1100666 | 46616135 ~ 46619686 (+) |
| G1873717 | LOC106609588 | other | downstream | 319905 | 48040594 ~ 48042832 (+) |
| G1875567 | NA | other | downstream | 2032399 | 49753088 ~ 49753438 (+) |
| G1875689 | LOC100136012 | other | downstream | 2328497 | 50049186 ~ 50050036 (+) |
| G1875816 | NA | other | downstream | 2522871 | 50243560 ~ 50244524 (+) |
