Gene
RNA
| Item | Value |
|---|---|
| gene id | G1873928 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 48081043 ~ 48081298 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2143854 | True | 256 | lncRNA | 0.41 | 1 | 48081043 | 48081298 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502894 | LOC106609588 | coding | downstream | 1558 | 48040588 ~ 48079485 (-) |
| LOC110502890 | LOC106609275 | coding | downstream | 191732 | 47801102 ~ 47889311 (-) |
| LOC110502884 | LOC106589545 | coding | downstream | 623034 | 47450667 ~ 47458009 (-) |
| LOC110502880 | LOC106609454 | coding | downstream | 826608 | 47232147 ~ 47254435 (-) |
| trnar-ccu-55 | NA | coding | downstream | 891255 | 47189716 ~ 47189788 (-) |
| LOC110502896 | rhbl4 | coding | upstream | 76413 | 48157711 ~ 48289997 (-) |
| LOC110502897 | LOC106609622 | coding | upstream | 280108 | 48361406 ~ 48372720 (-) |
| LOC110502900 | NA | coding | upstream | 299296 | 48380366 ~ 48387106 (-) |
| LOC110503131 | LOC106609649 | coding | upstream | 362171 | 48443469 ~ 48475356 (-) |
| LOC110502901 | NA | coding | upstream | 439388 | 48520679 ~ 48528302 (-) |
| G1873910 | NA | non-coding | downstream | 33333 | 48046333 ~ 48047710 (-) |
| G1873903 | NA | non-coding | downstream | 50161 | 48030627 ~ 48030882 (-) |
| G1873898 | NA | non-coding | downstream | 55338 | 48025485 ~ 48025705 (-) |
| G1873897 | NA | non-coding | downstream | 56185 | 48024588 ~ 48024858 (-) |
| G1873891 | NA | non-coding | downstream | 65455 | 48015361 ~ 48015588 (-) |
| G1873936 | NA | non-coding | upstream | 3434 | 48084732 ~ 48085113 (-) |
| G1873948 | NA | non-coding | upstream | 30513 | 48111811 ~ 48112025 (-) |
| G1873951 | NA | non-coding | upstream | 36127 | 48117425 ~ 48123432 (-) |
| G1873962 | NA | non-coding | upstream | 46295 | 48127593 ~ 48127884 (-) |
| G1873972 | NA | non-coding | upstream | 53542 | 48134840 ~ 48135083 (-) |
| G1873183 | NA | other | downstream | 821110 | 47257593 ~ 47312395 (-) |
| LOC110502870 | PHF5A | other | downstream | 1001253 | 47067897 ~ 47079813 (-) |
| G1873043 | NA | other | downstream | 1119390 | 46960622 ~ 46961653 (-) |
| G1873030 | NA | other | downstream | 1138586 | 46941286 ~ 46942457 (-) |
| G1872556 | NA | other | downstream | 1283393 | 46797235 ~ 46797650 (-) |
| LOC110503133 | LOC106609742 | other | upstream | 556693 | 48637596 ~ 48641914 (-) |
| LOC110502911 | LOC106609787 | other | upstream | 648314 | 48729606 ~ 48838648 (-) |
| G1875310 | NA | other | upstream | 1223221 | 49304519 ~ 49307135 (-) |
| LOC110503141 | LOC106610139 | other | upstream | 1700314 | 49732121 ~ 49855083 (-) |
