G1874341


Basic Information

Item Value
gene id G1874341
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 48497942 ~ 48498574 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2144343
ATGATATTGTAATAGTATGATcagggatttacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttctaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagataactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataattttgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2144343 True 633 lncRNA 0.40 1 48497942 48498574

Neighbor

gene id symbol gene type direction distance location
LOC110503131 LOC106609649 coding downstream 22586 48443469 ~ 48475356 (-)
LOC110502900 NA coding downstream 112260 48380366 ~ 48387106 (-)
LOC110502897 LOC106609622 coding downstream 125222 48361406 ~ 48372720 (-)
LOC110502896 rhbl4 coding downstream 207945 48157711 ~ 48289997 (-)
LOC110502894 LOC106609588 coding downstream 418457 48040588 ~ 48079485 (-)
LOC110502901 NA coding upstream 22112 48520679 ~ 48528302 (-)
LOC110502902 LOC106609735 coding upstream 32806 48531380 ~ 48534134 (-)
meiob meiob coding upstream 39318 48537892 ~ 48544347 (-)
LOC110502904 LOC106609741 coding upstream 63897 48562471 ~ 48594868 (-)
LOC110503133 LOC106609742 coding upstream 139022 48637596 ~ 48641914 (-)
G1874338 NA non-coding downstream 7012 48490617 ~ 48490930 (-)
G1874335 NA non-coding downstream 11725 48486002 ~ 48486217 (-)
G1874323 NA non-coding downstream 39600 48457553 ~ 48458342 (-)
G1874313 LOC106609288 non-coding downstream 57717 48435167 ~ 48440225 (-)
G1874343 NA non-coding upstream 3817 48502391 ~ 48507258 (-)
G1874756 NA non-coding upstream 110382 48608956 ~ 48609172 (-)
G1874758 NA non-coding upstream 116883 48615457 ~ 48616413 (-)
G1874745 NA non-coding upstream 213606 48712180 ~ 48715028 (-)
G1874805 NA non-coding upstream 221033 48719607 ~ 48719877 (-)
G1873183 NA other downstream 1238009 47257593 ~ 47312395 (-)
LOC110502870 PHF5A other downstream 1418152 47067897 ~ 47079813 (-)
G1873043 NA other downstream 1536289 46960622 ~ 46961653 (-)
G1873030 NA other downstream 1555485 46941286 ~ 46942457 (-)
G1872556 NA other downstream 1700292 46797235 ~ 46797650 (-)
LOC110502911 LOC106609787 other upstream 231038 48729606 ~ 48838648 (-)
G1875310 NA other upstream 805945 49304519 ~ 49307135 (-)
LOC110503141 LOC106610139 other upstream 1283038 49732121 ~ 49855083 (-)

Expression


Co-expression Network