G1874758



Basic Information


Item Value
gene id G1874758
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 48615457 ~ 48616413 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2144800
CACAGTCTGCCACAGATAGCAGATGTGCTGATGATTCTAGTGGGCAAAACTATAAACAAAATGTTTCATACAGCTGAGTTACAGAATACACTAAACATCCCTGTCTCATCTTCTAGCTGAACAAGATGTATGACAGTTAGCTGATGGAGAGATAACTGAGTCTGAAAGGAAGGATTCAAGTGAGCTGAACAGGGCTCTTCATCAGATCACTGAGCTGGGTTTCTACAAGTCTAATTATATGAGCTGAACAGGGCTCTTCATCAGATCACTGAGCTGGGTTTCTACAAGTCTAATTATATGAGCTGAACAGGGCTCTTCATCAGATCACTGAGCTGGGTTTCCATGAGTCTAATTATATGAGCTGAACAGGGCTCTTCATCAGATCACTGAGCTGGGTTTCCATGAGTCTAATTATATGAGCTGAACAGGGCTCTTCATCAGATCACTGAGCTGGGTTTCTACAAGTCTAATTATATGAGCTGAACAGGGCTCTTCATCAGATCACTGAGCTGGGTTTCTACAAGTCTAATTATATGAGCTGAAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2144800 True 544 lncRNA 0.42 2 48615457 48616413

Neighbor


gene id symbol gene type direction distance location
LOC110502904 LOC106609741 coding downstream 20589 48562471 ~ 48594868 (-)
meiob meiob coding downstream 71110 48537892 ~ 48544347 (-)
LOC110502902 LOC106609735 coding downstream 81323 48531380 ~ 48534134 (-)
LOC110502901 NA coding downstream 87155 48520679 ~ 48528302 (-)
LOC110503131 LOC106609649 coding downstream 140101 48443469 ~ 48475356 (-)
LOC110503133 LOC106609742 coding upstream 21183 48637596 ~ 48641914 (-)
LOC110502905 LOC106610051 coding upstream 34763 48651176 ~ 48658045 (-)
LOC110502909 cq039 coding upstream 70126 48686539 ~ 48696327 (-)
LOC110503134 LOC106610058 coding upstream 103647 48720060 ~ 48724580 (-)
LOC110502911 LOC106609787 coding upstream 113193 48729606 ~ 48838648 (-)
G1874756 NA non-coding downstream 6285 48608956 ~ 48609172 (-)
G1874343 NA non-coding downstream 108199 48502391 ~ 48507258 (-)
G1874341 NA non-coding downstream 116883 48497942 ~ 48498574 (-)
G1874338 NA non-coding downstream 124527 48490617 ~ 48490930 (-)
G1874335 NA non-coding downstream 129240 48486002 ~ 48486217 (-)
G1874745 NA non-coding upstream 95767 48712180 ~ 48715028 (-)
G1874805 NA non-coding upstream 103194 48719607 ~ 48719877 (-)
G1874808 NA non-coding upstream 109219 48725632 ~ 48726067 (-)
G1874809 NA non-coding upstream 111010 48727423 ~ 48727736 (-)
G1873183 NA other downstream 1355524 47257593 ~ 47312395 (-)
LOC110502870 PHF5A other downstream 1535667 47067897 ~ 47079813 (-)
G1873043 NA other downstream 1653804 46960622 ~ 46961653 (-)
G1873030 NA other downstream 1673000 46941286 ~ 46942457 (-)
G1875310 NA other upstream 688106 49304519 ~ 49307135 (-)
LOC110503141 LOC106610139 other upstream 1165199 49732121 ~ 49855083 (-)
G1875984 NA other upstream 1434878 50051291 ~ 50052791 (-)

Expression



Co-expression Network