G1874745


Basic Information

Item Value
gene id G1874745
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 48712180 ~ 48715028 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2144786
GCAGTAGGCACACATACAAACTCCCTTATAAAATACCCTTTATTTTTCACCATATACACATTATTTGTTCTAAGAGCAGGCTTCAAAGTGACCACCTGGCAAGCTAAGTCATACCTGCCTTGATTATACAATATAAGGTATAGAATCAAAGTTCCACTGAGCAAGCTAGATCAATATCAAGCTATATTAAACTATGTATACTGGATGGCACACATAGCAATACTTCTTCCCCCTGCAATACATCAGATGTACAGGCTTATAGCAGGGCAACCCTTCTACATGCACACACCATATTTCCATTCATAGAAGAGAGGGAAAACCTTTTCAGAATGTGCAATGTCAACACTTCTTTTAAAGTGTCTTTCAGAAGCGAGGTCATTTCTGACGCCTATGATGTTGGTTCATCATGTGCTAGGCTGTCCCatggtgtgtatatgtgtgtatatatatatatatataagacagAGGGGAAGATACAGTAACATGACTGCACTGCTTGTTCAACAAACCATGGAAAAACAAATTCAATAGGGTTATTTTCTTAGTTACAAACCAACGAGTGGACACTTGCCATAAATAGTGACCGGATTAATTTGCAACAACTTTAACGAATACATTTATACAATCTCTAACATTGAATCAGCATAAATCAGTGTAGGAAAAACTGTTGGAAGTCCATAAACGACCAAAACATGTTTAACACATGAAAAACCTTGATCGGTCTCATAAAGCAGTTCATGACTTCATTCTGCTTTGTAAAATAAAACTATTTCAAATACTGATAGAGCAGAAGAAAATACTAAATAAATTATTCCTACACTTGTCAATATTTCAAAATTCTCTGTTGATTACAGATATGTTAAACGTACCAACTCACTCAACTAGATCTTTTAATAATAACAAAACGGCAGGACTGTCATGTGTTTGTGATTATATGAAACAAGAAAGAGAATAAAGATTTCAGTACTCCATGTTCTTGCACATACCAGTAAAGCAGTGTTGTTTCTGAAAACATCAATGTCACCTTCGCTAAATGGTGAGAGCCTGGCTCCCACTCAGGCCATCCCTCTTTTCAGCACAGTCACTGTTTCTGATCAGCTGTTGAGACCATTGAGCTAACTGGCTAGCATCTGAGTGATGTGCCAGCACAGCCAGCGAGAGACAAGAACATGGTAGAGTTCAGGTGAAAATATAACATTGGACTCCCCAATCGGAGACCAAATGTCCCCTTCATAGTGTTCATAAACATCTCTTCCATAGGCTTATTTTTTACATCAACTAGACAAAACTTCAGTCCATTAATTCAGTTATTATTCAACACCAGACATACAATATTCAGTCTGCCTCCATATCTGTACTGAAAACCACATTACAGACTTTAGGTTTTAAAGTTATTGTTCTCATAAGACTAACACATTAGCACTTCTGACTGACTCTTACAGCATTATCAGCTACTCTATTCACTATGAATGTGATGCAATCATGCTTGGGCTCCACGACAATATCTGGTCTTTGGCTTCCCAACAGCATCGTACCTGTCCCAATATATGGATGAACAGAAAATCATTGTCAGGTCGATACTACTTATTTGTTcgttaaaataaaatgttttacacCTCAATAAACAACCATAGCAGTGCATTTAATGATTTAATGATTGTTGTCTTACTCTAAAAAACGTCAAATGACAATGAATAACCTGAAAATAAATCTCTACAAACTAATATTCTAGAATTCTACACACTCAAAAACAAAGTTAAATGGATAAAGTAAGACATCCAGTCAGGGGCTATAATGGACAATATAATATACTTGGAATTAAACACATCGTAAAAACAATACAATGATCCAGAATATTCCCCAATCATACATATCATGATATATTTCAATACTACCTGCCCTCGTCTGACCTATAAAAAAGGTTAACATGAACTGTCCCTGGACTTCATTTAGCTCCCTTTGGACTTCCCTTTCAGTCCGAGGAGGGATTGAAGGGTGGATGGATCTGTTAACACATGCAGTAGAGTAGGGGACGACTGGATAGGGATGGCTTCTTGCtgtcagaacagagcagaatatgTGTAGTGCTGTAGGCAGGGTACGTCTCATATTACCCTTCAGAGGAAGACCACCCCCCGGACAGAGTGAGCTGCTGGTTTATAAAGATGGCTGTTGATACTCCACAGTCCTTCTTACGCTGGAGAAAGTTCCAAACCAACTGTTAGATAGGGACTGTTGATTATGGGAATACATTGCAACCTTGTCCCTAATGAAGCTGGTTTCtttcaacaaaaaaacaacaaacaaaaaaatgtacaATGCGTGGGGGTTCCCTTCGCATTGTAGTAAATTGGCAGAGAACATGAATATGTGTTACTGGGTAGCAGACATTTAGCTGATGGTAGACAGCTCCAGAGTGGGAGGATGAGAAAGTGGATTTGTCACAGACAACAGTCTGGGGACTCCAGGCACTGGTCAGGTCAGAAGTCAAAAGGTTAAGAGAGGTCTACTAAGCGAGGGgtttcaaacctctGGTCTTTCAGACTTCTTCTGGGGAGCACCGGTAGTTGCACCGGGATCACCACTAGGGGGTGAGGGGAGGCTGGGCACCGTCTCTGCTGCCTTCGCCCGCTCCTCCAGAAACTTGTCAAAC

Function

NR:

description
TOM1-like protein 2 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2144786 True 2653 lncRNA 0.39 2 48712180 48715028

Neighbor

gene id symbol gene type direction distance location
LOC110502909 cq039 coding downstream 15853 48686539 ~ 48696327 (-)
LOC110502905 LOC106610051 coding downstream 54135 48651176 ~ 48658045 (-)
LOC110503133 LOC106609742 coding downstream 70266 48637596 ~ 48641914 (-)
LOC110502904 LOC106609741 coding downstream 117312 48562471 ~ 48594868 (-)
meiob meiob coding downstream 167833 48537892 ~ 48544347 (-)
LOC110503134 LOC106610058 coding upstream 5032 48720060 ~ 48724580 (-)
LOC110502911 LOC106609787 coding upstream 14578 48729606 ~ 48838648 (-)
LOC110503135 trrap coding upstream 250250 48965278 ~ 49138248 (-)
LOC110503068 LOC106609795 coding upstream 426848 49141876 ~ 49145958 (-)
tmem130 LOC106610061 coding upstream 435734 49150762 ~ 49156151 (-)
G1874758 NA non-coding downstream 95767 48615457 ~ 48616413 (-)
G1874756 NA non-coding downstream 103008 48608956 ~ 48609172 (-)
G1874343 NA non-coding downstream 204922 48502391 ~ 48507258 (-)
G1874341 NA non-coding downstream 213606 48497942 ~ 48498574 (-)
G1874338 NA non-coding downstream 221250 48490617 ~ 48490930 (-)
G1874805 NA non-coding upstream 4579 48719607 ~ 48719877 (-)
G1874808 NA non-coding upstream 10604 48725632 ~ 48726067 (-)
G1874809 NA non-coding upstream 12395 48727423 ~ 48727736 (-)
G1874863 NA non-coding upstream 136896 48851924 ~ 48852264 (-)
LOC110502901 NA other downstream 190508 48520679 ~ 48528302 (-)
G1873183 NA other downstream 1452247 47257593 ~ 47312395 (-)
LOC110502870 PHF5A other downstream 1632390 47067897 ~ 47079813 (-)
G1873043 NA other downstream 1750527 46960622 ~ 46961653 (-)
G1875310 NA other upstream 589491 49304519 ~ 49307135 (-)
LOC110503141 LOC106610139 other upstream 1066584 49732121 ~ 49855083 (-)
G1875984 NA other upstream 1336263 50051291 ~ 50052791 (-)
LOC110503025 LOC106610281 other upstream 1497022 50212050 ~ 50253496 (-)

Expression


Co-expression Network