Gene
RNA
| Item | Value |
|---|---|
| gene id | G1875269 |
| gene name | LOC106609825 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 49226267 ~ 49226718 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2145367 | True | 224 | lncRNA | 0.58 | 2 | 49226267 | 49226718 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tmem130 | LOC106610061 | coding | downstream | 70116 | 49150762 ~ 49156151 (-) |
| LOC110503068 | LOC106609795 | coding | downstream | 80309 | 49141876 ~ 49145958 (-) |
| LOC110503135 | trrap | coding | downstream | 88019 | 48965278 ~ 49138248 (-) |
| LOC110502911 | LOC106609787 | coding | downstream | 387619 | 48729606 ~ 48838648 (-) |
| LOC110503134 | LOC106610058 | coding | downstream | 501687 | 48720060 ~ 48724580 (-) |
| LOC110503138 | LOC106609842 | coding | upstream | 17005 | 49243723 ~ 49254357 (-) |
| LOC110502914 | NA | coding | upstream | 28138 | 49254856 ~ 49283890 (-) |
| rsph10b | LOC106609906 | coding | upstream | 133092 | 49359810 ~ 49372872 (-) |
| LOC110502922 | LOC106561172 | coding | upstream | 148360 | 49375078 ~ 49379011 (-) |
| LOC110503140 | LOC106609966 | coding | upstream | 200304 | 49427022 ~ 49477361 (-) |
| G1875080 | NA | non-coding | downstream | 8930 | 49213570 ~ 49217337 (-) |
| G1875036 | NA | non-coding | downstream | 64567 | 49161364 ~ 49161700 (-) |
| G1874985 | NA | non-coding | downstream | 122213 | 49101656 ~ 49104054 (-) |
| G1875013 | NA | non-coding | downstream | 125371 | 49100662 ~ 49100896 (-) |
| G1875001 | LOC106613263 | non-coding | downstream | 149226 | 49076804 ~ 49077041 (-) |
| G1875272 | LOC106609825 | non-coding | upstream | 2115 | 49228833 ~ 49240203 (-) |
| G1875277 | NA | non-coding | upstream | 6280 | 49232998 ~ 49268282 (-) |
| G1875284 | NA | non-coding | upstream | 14817 | 49241535 ~ 49243532 (-) |
| G1875294 | NA | non-coding | upstream | 48393 | 49275111 ~ 49275436 (-) |
| G1875310 | NA | non-coding | upstream | 77801 | 49304519 ~ 49307135 (-) |
| LOC110503133 | LOC106609742 | other | downstream | 584396 | 48637596 ~ 48641914 (-) |
| LOC110502901 | NA | other | downstream | 704595 | 48520679 ~ 48528302 (-) |
| G1873183 | NA | other | downstream | 1966334 | 47257593 ~ 47312395 (-) |
| LOC110502870 | PHF5A | other | downstream | 2146477 | 47067897 ~ 47079813 (-) |
| LOC110503141 | LOC106610139 | other | upstream | 554894 | 49732121 ~ 49855083 (-) |
| G1875984 | NA | other | upstream | 824573 | 50051291 ~ 50052791 (-) |
| LOC110503025 | LOC106610281 | other | upstream | 985332 | 50212050 ~ 50253496 (-) |
| G1876460 | NA | other | upstream | 1228603 | 50455321 ~ 50455709 (-) |
