G1875277


Basic Information

Item Value
gene id G1875277
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 49232998 ~ 49268282 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2145378
gtagatgtgtgtgttacctacccttatcacctgggggcagcccatcaggaagtccaggatccagttgtagagggaggtgtttcgtcccagggtcattagcttagtgatgagctttgtgggcactatggtgttgagctctgagctgtagttaatgaacagcattctcacacaggtgttcctttgtccaggtgggaaagggcagtgtgagtgtgattgagattgcgtcatctgtggatctgtttgggcggtatgtgaattggagtgttTCTAGGGCttccggcatgatggtgttgatgtgagcctgcttaaaacatgtaggttttacagactcggtcaggaagaggttgaaaatgtcagtggagACACCTACCAGgtggtccgcgcatgctctgagtacaggtcctggtaatccatctggccttgcggccttgtgaatgttgacctggttaaaggtcttactcacgtcagctatgGAGAATGTGATCACACCGTCgttcggaacagctgatgctctcatgcatgcctcagtgttgcttgcctcgaagcgagcatagaagtgatttagcttgtctggtaggctcgtgtcactgggcagctcgcggctatgcttccctttgtagtctgtaatagtttgcaagccctgccacatgccggtgtagtatgattcaatcttagccctgtattgacgcttttcctgtatgatggtttgtcgcagggcatagcaggatttcttctAAGCTTCTGGGtaagagtcccgcaccttgaaagcagcagctctcacctttagctcagtgcgaatgttgcctgtaatccatggcttctggttcgggtatgtacgtacagtcactgtggggacgacgtcctcaatgcacttattgataaagccagtgactgatgtggtgtattcctcaatgtcatcggaagaatcccggaacatgttccagtctgtgatagcaaaacagtcctctagtttagcatctgcttcatctgaccacttttttatagacccaGTCACTGgggcttcctgctttaatttttgcttgtaagcaggaatcaggaggatagaattgtggtcggatttaccaaatggagggcgagggagagctttgtacgcgtctctgtgtgtggagtacaggtgatctagaattgttttccctctggttgcacatttaacatgttgatagaaatgtggtagaactgatttaagtttccctgcattaaagtctccggccactaggagcgccgcctctgggtgagtggtttcctgtttgcttatttcctcagacagctgactgagtgcggtcttagtgccagcatctgtctgtggtggtaaattaacagccacgaaaagtatagctgaaaactctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2145378 True 1368 lncRNA 0.48 2 49232998 49268282

Neighbor

gene id symbol gene type direction distance location
tmem130 LOC106610061 coding downstream 76847 49150762 ~ 49156151 (-)
LOC110503068 LOC106609795 coding downstream 87040 49141876 ~ 49145958 (-)
LOC110503135 trrap coding downstream 94750 48965278 ~ 49138248 (-)
LOC110502911 LOC106609787 coding downstream 394350 48729606 ~ 48838648 (-)
LOC110503134 LOC106610058 coding downstream 508418 48720060 ~ 48724580 (-)
rsph10b LOC106609906 coding upstream 91528 49359810 ~ 49372872 (-)
LOC110502922 LOC106561172 coding upstream 106796 49375078 ~ 49379011 (-)
LOC110503140 LOC106609966 coding upstream 158740 49427022 ~ 49477361 (-)
LOC110502939 LOC105031476 coding upstream 245034 49513316 ~ 49523862 (-)
LOC118943894 NA coding upstream 301759 49570041 ~ 49583884 (-)
G1875269 LOC106609825 non-coding downstream 6280 49226267 ~ 49226718 (-)
G1875080 NA non-coding downstream 15661 49213570 ~ 49217337 (-)
G1875036 NA non-coding downstream 71298 49161364 ~ 49161700 (-)
G1874985 NA non-coding downstream 128944 49101656 ~ 49104054 (-)
G1875013 NA non-coding downstream 132102 49100662 ~ 49100896 (-)
G1875294 NA non-coding upstream 6829 49275111 ~ 49275436 (-)
G1875310 NA non-coding upstream 36237 49304519 ~ 49307135 (-)
G1875335 NA non-coding upstream 64257 49332539 ~ 49333029 (-)
G1875342 NA non-coding upstream 71521 49339803 ~ 49340067 (-)
G1875344 NA non-coding upstream 72661 49340943 ~ 49341631 (-)
LOC110503133 LOC106609742 other downstream 591127 48637596 ~ 48641914 (-)
LOC110502901 NA other downstream 711326 48520679 ~ 48528302 (-)
G1873183 NA other downstream 1973065 47257593 ~ 47312395 (-)
LOC110502870 PHF5A other downstream 2153208 47067897 ~ 47079813 (-)
LOC110503141 LOC106610139 other upstream 513330 49732121 ~ 49855083 (-)
G1875984 NA other upstream 783009 50051291 ~ 50052791 (-)
LOC110503025 LOC106610281 other upstream 943768 50212050 ~ 50253496 (-)
G1876460 NA other upstream 1187039 50455321 ~ 50455709 (-)

Expression


Co-expression Network