G1875344


Basic Information

Item Value
gene id G1875344
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 49340943 ~ 49341631 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2145474
agtttgaaggtaggccttgaaatatatccacaggtacacctccaattgactcaaattatgtcaatcagcctatcagaagcttctaaagccatgacatcattttctggaattttccaagcagggttaaaggcacagtcagcttagtgtatgtaaacttctgacctactggaattgtgatacagtgaattataagtgaaacaatctgtctgtaaacaattgttggaaagattacttgtgtaatgcacaaagtagatgtcctaaccgacttgccaagactatagtttgttaacaagaaatttgtggagtggttgaaaaaacgagttttaatgactccaacataagtgtatgtaaactcccgacttcaactgtagttcttCCATCACTAAGTTGACCTAACAATATAGTTCTTCCATCACTACGTTGACCTAACAATATAGTTCTTCCATCACTACGTTGACCTAACAATATAGTTCTTCCATCACTAAGTTGACCTAACAATATAGTTCTTCCATCACTACGTTGACATAATATAGTTCTTCCATCACTACGTTGACCTAACAATATAGTTATTCCATCACTACGTTGAC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2145474 True 587 lncRNA 0.36 2 49340943 49341631

Neighbor

gene id symbol gene type direction distance location
LOC110502914 NA coding downstream 57053 49254856 ~ 49283890 (-)
LOC110503138 LOC106609842 coding downstream 86586 49243723 ~ 49254357 (-)
tmem130 LOC106610061 coding downstream 184792 49150762 ~ 49156151 (-)
LOC110503068 LOC106609795 coding downstream 194985 49141876 ~ 49145958 (-)
LOC110503135 trrap coding downstream 202695 48965278 ~ 49138248 (-)
rsph10b LOC106609906 coding upstream 18179 49359810 ~ 49372872 (-)
LOC110502922 LOC106561172 coding upstream 33447 49375078 ~ 49379011 (-)
LOC110503140 LOC106609966 coding upstream 85391 49427022 ~ 49477361 (-)
LOC110502939 LOC105031476 coding upstream 171685 49513316 ~ 49523862 (-)
LOC118943894 NA coding upstream 228410 49570041 ~ 49583884 (-)
G1875342 NA non-coding downstream 876 49339803 ~ 49340067 (-)
G1875335 NA non-coding downstream 7914 49332539 ~ 49333029 (-)
G1875310 NA non-coding downstream 33808 49304519 ~ 49307135 (-)
G1875294 NA non-coding downstream 65507 49275111 ~ 49275436 (-)
G1875277 NA non-coding downstream 72661 49232998 ~ 49268282 (-)
G1875349 NA non-coding upstream 5430 49347061 ~ 49347300 (-)
G1875356 NA non-coding upstream 17827 49359458 ~ 49359682 (-)
G1875329 LOC100195543 non-coding upstream 36717 49378348 ~ 49391719 (-)
G1875384 NA non-coding upstream 87934 49429565 ~ 49429786 (-)
LOC110502911 LOC106609787 other downstream 603661 48729606 ~ 48838648 (-)
LOC110503133 LOC106609742 other downstream 699072 48637596 ~ 48641914 (-)
LOC110502901 NA other downstream 819271 48520679 ~ 48528302 (-)
G1873183 NA other downstream 2081010 47257593 ~ 47312395 (-)
LOC110503141 LOC106610139 other upstream 439981 49732121 ~ 49855083 (-)
G1875984 NA other upstream 709660 50051291 ~ 50052791 (-)
LOC110503025 LOC106610281 other upstream 870419 50212050 ~ 50253496 (-)
G1876460 NA other upstream 1113690 50455321 ~ 50455709 (-)
G1876522 NA other upstream 1424399 50766030 ~ 50770317 (-)

Expression


Co-expression Network