G1875179


Basic Information

Item Value
gene id G1875179
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 49435759 ~ 49436268 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2145270
ttacataagtatttcagACCCTtcgttatgagactcgaaattgagctcaggtgcatcctgtttccattgatcatccttgagatgtttctacaacttcattggagtccacctgtggtacattcaattgattggacatgatttggaaaggaaaacacctgtctatataaggtgccacagttgccagtgcatgtcagagcaaaaaccaagtcatgaggtcgaaggaattgtctgtggaGTTCTgagacgggattgtgtcgaggcacagatctggggaaggataccaaaacatttctgcagcattaaaggtccccaagaacacagtggcctcgtcattcttaaatgcaagaagtttggaaccatcaactcttcctagagctggccgcccggcaaaactgagcaatcggggtagaagggccttggtcagggaggtgaagaacccgatggtcactctgacagagctccaaagttcctctgtggagatgggagaaccttccagaaggacaaccatct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2145270 True 510 lncRNA 0.47 1 49435759 49436268

Neighbor

gene id symbol gene type direction distance location
LOC110502920 LOC106609945 coding upstream 8472 49402598 ~ 49427287 (+)
LOC110502921 LOC100195543 coding upstream 33460 49378136 ~ 49402299 (+)
LOC110503139 ccz1 coding upstream 87442 49335215 ~ 49348317 (+)
LOC110502917 LOC106610070 coding upstream 109728 49316751 ~ 49326031 (+)
LOC110502916 LOC106609875 coding upstream 128628 49304612 ~ 49307131 (+)
LOC110502935 rac1 coding downstream 66671 49502939 ~ 49509589 (+)
LOC110502927 LOC106589600 coding downstream 87713 49523981 ~ 49532309 (+)
LOC110502936 LOC106609997 coding downstream 116070 49552338 ~ 49562568 (+)
LOC110503021 LOC106610401 coding downstream 473556 49909824 ~ 49962893 (+)
tepsin LOC106610392 coding downstream 528908 49965176 ~ 49974108 (+)
G1875159 NA non-coding upstream 76706 49358736 ~ 49359053 (+)
G1875155 NA non-coding upstream 78993 49356555 ~ 49356766 (+)
G1875142 NA non-coding upstream 93893 49340933 ~ 49341866 (+)
G1875136 NA non-coding upstream 101992 49333561 ~ 49333767 (+)
G1875180 NA non-coding downstream 471 49436739 ~ 49437001 (+)
G1875182 NA non-coding downstream 4615 49440883 ~ 49441650 (+)
G1875183 NA non-coding downstream 5438 49441706 ~ 49442110 (+)
G1875184 NA non-coding downstream 5870 49442138 ~ 49442619 (+)
G1875186 NA non-coding downstream 7797 49444065 ~ 49444416 (+)
G1873717 LOC106609588 other upstream 1392927 48040594 ~ 48042832 (+)
LOC110502893 LOC106609573 other upstream 1419276 48007176 ~ 48021129 (+)
LOC110502887 NA other upstream 1964956 47467771 ~ 47470803 (+)
LOC110502882 csnk1d other upstream 2048068 47374444 ~ 47435736 (+)
LOC110503127 LOC106609422 other upstream 2110980 47312009 ~ 47374126 (+)
G1875567 NA other downstream 316820 49753088 ~ 49753438 (+)
G1875689 LOC100136012 other downstream 612918 50049186 ~ 50050036 (+)
G1875816 NA other downstream 807292 50243560 ~ 50244524 (+)
G1876374 Rpl38 other downstream 1329831 50766099 ~ 50770263 (+)
G1877363 NA other downstream 2022439 51458707 ~ 51459345 (+)

Expression


Co-expression Network