XLOC_037797 (crygm2d2)


Basic Information

Item Value
gene id XLOC_037797
gene name crygm2d2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 22317479 ~ 22318511 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00074195
CTTGGCCTTGTATAAAAGCACAGGTAGCAGTCAGTCAACAAGCAGAATCAGCTTCAGCTTCTCCCCTGTAGAACCACTCAACAACAACCAAAGCAACCATGATGGGCAAGGTCATCTTCTACGAGGACAGGAACTTCCAGGGTCGCTCTTATGAGTGTATGGGAGACTGTGGTGACTTCTCCTCCTACATGAACCGCTGTCACTCTTGCAGAGTGGAGAGTGGCTGCTGGATGATGTACGATCAGCCCAACTACATGGGAAGTGGATATTTCTTCAGGAGAGGAGAGTATGCTGATTACATGTCTATGTTTGGAATGAGCAACTGCATCAGGTCCTGCCGTATGATCCCTATGTACAGGGGATCCTACAGAATGAGGATCTACGAGAGGGAGAACTTTGGAGGTCAGATGTACGAGATGATGGATGACTGTGAAAACATCATGGACCGTTACCGCATGTCTCACTGTCAGTCCTGCCATGTGATGGACGGCCACTGGCTCATGTATGAGCAGGCCAATTACAGAGGCAGGATGTGGTACTTCGGACCTGGAGAGTACAGGAACTTCAGCAACTTTGGTGGCATGAGGTTCATGAGCATGAGGCGTATCATGCACTCCTGGTACTAGTTTTTCATAGTTTCAATAAaataatttccaaacaaaagtaAACATTGTGTCTCGATAATTAGTATTCCACAAAACACAACAATGTCTTTGTTGTATTTACCCCAAAGACTTCATCACTTCATCACATTTATTTAGCATCACTATAACTATTTGCAGT
>TCONS_00074196
AGCAGAATCAGCTTCAGCTTCTCCCCTGTAGAACCACTCAACAACAACCAAAGCAACCATGATGGGCAAGGTAAACCCCAgttaacatttaaattcaaagtaATACTCATTTTTAATTGCATTCATAAAAATATAATCCAATAAACGCAAACTTTGAATTTCTAGGTCATCTTCTACGAGGACAGGAACTTCCAGGGTCGCTCTTATGAGTGTATGGGAGACTGTGGTGACTTCTCCTCCTACATGAACCGCTGTCACTCTTGCAGAGTGGAGAGTGGCTGCTGGATGATGTACGATCAGCCCAACTACATGGGAAGTGGATATTTCTTCAGGAGAGGAGAGTATGCTGATTACATGTCTATGTTTGGAATGAGCAACTGCATCAGGTCCTGCCGTATGATCCCTATGTACAGGGGATCCTACAGAATGAGGATCTACGAGAGGGAGAACTTTGGAGGTCAGATGTACGAGATGATGGATGACTGTGAAAACATCATGGACCGTTACCGCATGTCTCACTGTCAGTCCTGCCATGTGATGGACGGCCACTGGCTCATGTATGAGCAGGCCAATTACAGAGGCAGGATGTGGTACTTCGGACCTGGAGAGTACAGGAACTTCAGCAACTTTGGTGGCATGAGGTTCATGAGCATGAGGCGTATCATGCACTCCTGGTACTAGTTTTTCATAGTTTCAATAAaataatttccaa

Function

symbol description
crygm2d2 Predicted to be a structural constituent of eye lens. Predicted to be involved in lens development in camera-type eye and visual perception. Is expressed in lens.

GO:

id name namespace
GO:0002088 lens development in camera-type eye biological_process
GO:0007601 visual perception biological_process
GO:0005575 cellular_component cellular_component
GO:0005212 structural constituent of eye lens molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060918-1 Predicted to be a structural constituent of eye lens. Predicted to be involved in lens development in camera-type eye and visual perception. Is expressed in lens.

Ensembl:

ensembl_id ENSDARG00000086917

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00074195 False 783 mRNA 0.45 3 22317479 22318511
TCONS_00074196 True 712 lncRNA 0.45 2 22317605 22318471

Neighbor

gene id symbol gene type direction distance location
XLOC_037796 crygm2d10 coding downstream 6560 22309838 ~ 22310919 (-)
XLOC_037795 crygm2d21 coding downstream 18067 22298246 ~ 22299412 (-)
XLOC_037794 crygm2d3 coding downstream 35625 22280471 ~ 22281854 (-)
XLOC_037793 crygm2d7 coding downstream 45298 22271056 ~ 22272181 (-)
XLOC_037792 crygm2d4 coding downstream 71907 22244537 ~ 22245572 (-)
XLOC_037798 crygm2d1 coding upstream 20067 22338578 ~ 22339582 (-)
XLOC_037799 crygm2f coding upstream 26084 22344595 ~ 22352280 (-)
XLOC_037800 crygm3 coding upstream 35770 22354281 ~ 22361681 (-)
XLOC_037801 NA coding upstream 299945 22618456 ~ 22626761 (-)
XLOC_037802 neb coding upstream 486627 22805138 ~ 22892838 (-)
XLOC_037770 NA non-coding downstream 499742 21816200 ~ 21817737 (-)
XLOC_037767 CR392366.1 non-coding downstream 884818 21432545 ~ 21432661 (-)
XLOC_037761 NA non-coding downstream 1111925 21194606 ~ 21205554 (-)
XLOC_037757 NA non-coding downstream 1512358 20802497 ~ 20805121 (-)
XLOC_037756 NA non-coding downstream 1530826 20784043 ~ 20786653 (-)
XLOC_037813 CR392363.2 non-coding upstream 1064903 23383414 ~ 23388075 (-)
XLOC_037814 NA non-coding upstream 1372747 23691258 ~ 23694572 (-)
XLOC_037815 NA non-coding upstream 1378553 23697064 ~ 23700635 (-)
XLOC_037823 NA non-coding upstream 1589572 23908083 ~ 23909865 (-)

Expression


Co-expression Network