G1875401



Basic Information


Item Value
gene id G1875401
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 49465330 ~ 49466831 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2145535
AATTAAGACGTATTAGATTTTATTATTTCATATTGTTGCATTGTCCATAAGGAAACTGCcagtaagcatttcgttggatggtgaataccatgtgtatcctgtatatacgactaataaaactgtAAACTTGTATCTGCTTTGATCCGTGTGACTGATAAACTGAGTGAAACGGTTATAGTACTGTAGCAGAGTTAGTTAGTGTAACAGTCATCGTACTGTAGCAGGCTTAATTAGTTAGTATAGCGGTTATGTTACTGTAGCAGAGTTAGTTAGTGTAACAGTCATCGTACTGTAACGGTTGATAGTTTGTGAAATGGTCATGTTACTGTAGCAGGCTTAATTAGTTAGTGTAACGGTTATGTTACTGTAGCAGGCTTAATTAGTTAGTGTAACGGTTATGTTACTGTAGCAGGCTTAATTAGTTAGTGTAACGCTCATGTTACTGTAGCAGGCTTAATTAGTTAGTGTAACGGTTATGTTACTGTAGCAGGCTTAATTAGTTAGTGTAACGGTCATCGTACTGTAGCAGGCTTAGTTAGTATAGCGGTTATGTTACTATAGCAGGCTTAATTAGTTAGTGTAACGGTCATCGTAGTGTAGCAGGCTTAGTTAGTATAGCGGTTATGTTACTATAGCAGGCTTAATTAGTTAGTGTAACGGTCATCGTACTGTAGCAGGCTTAATTAGTTAGTATAACGGTTATGTTACTGTAGCAGGCTTAATTAGTTAGTATAGCGGATATGTTACTATAGCAGGCTTAATTAGTTAGTGTAACGGTCATCGTAGTGTAGCAGGCTTAGTTAGTATAGCGGTTATGTTACTGTAGCAGGCTTAGTTAATTAGTTAGTATAACGGTTATGTTACTGTAGCAGGCTTAGTTAGTATAACGGCTGTTACTGTAGCAGGCTTAGTTAATTAGTTAGTATAGCGGTTATGTTACTGTAGCAGGCTTAGTTAGTGTGACGGTTATGTTACTGCAGCAGGCTTAGTTGGATAGTGTGACGGTTATGTTACTGCAGCAGGCTTAGTTGGATAGTGTGACGGTCATCGGTACTGCAGCAGGCTTAGTTAGATAGTGTGACGGTTATGTTACTGCAGCAGGCTTAGTTGGATAGTGTGACGGTCATCGGTACTGCAGCAGGCTTAGTTGGATAGTGTGACGGTCATCGGTACTGCAGCAGGCTTAGTTGGATAGTGTGACGGTTATGTTACTGCAGCAGGCTTAGTTAGATAGTGTGACGGTTATGTTACTGCAGCAGGCTTAGTTGGATAGTGTGACGGTCATCGGTACTGCAGCAGGCTTAGTT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2145535 True 1307 lncRNA 0.40 2 49465330 49466831

Neighbor


gene id symbol gene type direction distance location
LOC110502922 LOC106561172 coding downstream 86319 49375078 ~ 49379011 (-)
rsph10b LOC106609906 coding downstream 92458 49359810 ~ 49372872 (-)
LOC110502914 NA coding downstream 181440 49254856 ~ 49283890 (-)
LOC110503138 LOC106609842 coding downstream 210973 49243723 ~ 49254357 (-)
tmem130 LOC106610061 coding downstream 309179 49150762 ~ 49156151 (-)
LOC110502939 LOC105031476 coding upstream 46485 49513316 ~ 49523862 (-)
LOC118943894 NA coding upstream 103210 49570041 ~ 49583884 (-)
birc5a birc5 coding upstream 117645 49584476 ~ 49587935 (-)
LOC110502932 LOC106610076 coding upstream 125162 49591993 ~ 49633864 (-)
LOC110503141 LOC106610139 coding upstream 265290 49732121 ~ 49855083 (-)
G1875397 NA non-coding downstream 11298 49453745 ~ 49454032 (-)
G1875394 NA non-coding downstream 17048 49447979 ~ 49448282 (-)
G1875392 NA non-coding downstream 18620 49446495 ~ 49446710 (-)
G1875391 NA non-coding downstream 19342 49445732 ~ 49445988 (-)
G1875388 NA non-coding downstream 26371 49438477 ~ 49438959 (-)
G1875404 NA non-coding upstream 2501 49469332 ~ 49469622 (-)
G1875405 NA non-coding upstream 3183 49470014 ~ 49470233 (-)
G1875364 NA non-coding upstream 45569 49512400 ~ 49513263 (-)
G1875368 LOC106589600 non-coding upstream 61034 49527865 ~ 49529183 (-)
G1875455 NA non-coding upstream 108435 49575266 ~ 49575510 (-)
G1875310 NA other downstream 158195 49304519 ~ 49307135 (-)
LOC110502911 LOC106609787 other downstream 728048 48729606 ~ 48838648 (-)
LOC110503133 LOC106609742 other downstream 823459 48637596 ~ 48641914 (-)
LOC110502901 NA other downstream 943658 48520679 ~ 48528302 (-)
G1873183 NA other downstream 2205397 47257593 ~ 47312395 (-)
G1875984 NA other upstream 584460 50051291 ~ 50052791 (-)
LOC110503025 LOC106610281 other upstream 745219 50212050 ~ 50253496 (-)
G1876460 NA other upstream 988490 50455321 ~ 50455709 (-)
G1876522 NA other upstream 1299199 50766030 ~ 50770317 (-)

Expression



Co-expression Network