XLOC_000378 (inab)


Basic Information

Item Value
gene id XLOC_000378
gene name inab
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 31864404 ~ 31867717 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000648
AGAAGCGTGGCTAAATTATTGATTGGGACGGTCCTGCTATAAAAGGAGACGCCGCCGGAGTTCTGCTCCTTATCGTCAAACGCCAAGATGAGCTACGGATCCGACATCTACTCTGCCTCTTCCTACCGGAAGATCTTCGGAGATTCCACCCGTTTCTCAGCCTCTCCATCCCGGCTGAGCAGCTCCCGGAGCGGGTTTAAATCCCAGTCTGTGAACCGCCCCAACATCCCAAGCTCCTACAAGCGCTCCACCCGATCTGGCTTCCCGTCTTCTTCTCTGGACAGCTTCGATTTCACCCAGAGTACCGTGCTTAACAATGAGTTTAAAATCATCCGCACCAATGAGAAGGAGCAGATGCAAGGGCTCAACGACCGTTTCGCGATGTTCATTGAGAAAGTTCGCAATCTGGAGCAGCACAATAAAGTGCTGGAAACCGAACTCGTGACTCTGCGCCAGCGCCAGACAGAACCGTCCCGTCTGGCCGAACTTTACCAGCAGGAGATCCGCGAGCTGCGCTCCCAACTCGAGGAACTCAACGCCGAGAAGAACCAGATGATGTTCGAGCGCGACAGTATCGAGGAAGACCTACAGAAACTTCACGAGAAGTTTGAGGAAGAGATGAGAATGCGCGAGGAGGCCGAGCAAACCCTGAGAGCTTTCAAGAAGGACGTGGACAACGCCTCCATGGTGCGTCTAGACCTGGAGAAAAAGGTCGAATCCCTTCTGGATGAAATCAACTTTTTAAGGAAGGTGCACGAGGAGGAGGTGGCCGAGCTCATGAACATGATCCAGGCTAGCCAGGTGTCCGTGGAGATGGAAGTGGCCAAACCCGACCTCACCTCCGCCCTAAAGGATATTCGCGGCCAGTATGAAGCAATGGCGAGCAAGAACTTGCAGTCGGCTGAAGAGTGGTACAAGTCCAAGTTCGCCGACCTTAGCGAACAGGCCAACAAGAGCAACGAGGTCATTCGCGCTAGCAGGGAGGAGCTCAACGAGTTCAGGAGGCAGCTGCAGTCCAAGACCATCGAGATCGAGAGTCTGAGGGGTACAAATGAATCTCTTGAAAGGCAGATTCATGAGATGGAGGACAGGCACAACGCCGAGATCATGGGCTACCAGGATTCCATTGGGGAGCTGGAGAATGATCTGAGGACCACTAAGAGTGAGATGGCCCGTCATCTTAGGGAGTATCAAGACTTGCTGAATGTCAAGATGGCGCTTGACATAGAAATAGCTGCTTACAGGAAGCTGTTGGAAGGGGAGGAGACGCGTATCAGCACTGGGATCACCTACCCCACCCCTGCCTCGGTGTCCAGCTACAGCTACCAGTCCCGCCTGTACAGCAGCACCAGCATGAGCTCAAAGAAGGAGGTCAAGGATGATGACGACAAACAGCAGAGCGGCAAACCCGGCAAAGGCTCCTCCCAGTCTGACGACTCCAAGAAGAATGACAAGATCGACTCCGGAGACCTGAACTCCACCAACCAGAAAAACTAAAAGTCTCACCCCTTATTACTTTCTTCCTCTTCTCCCTCTGCCTTCTCCATTACCCCTTTCCTTTCTCCAAGCAATCTCTCTCCACAAAAGGGGGTCTCAGAGAGGAATCTAGGTGTATTTCAATTTATTCTCTACTCAATAAACCTCCCACTCAGTCACAGGGCAGCAGTCCCATTGTAGCAAATCACTTGCAACTCAGTGCACCCCAGGTGTCACAGTCTTGGATGCACATAATCAATTTCCAGGTGCTCTCGGAATCATATCACCACTGTTTATCTGCACTATAATGGGCTTCTCTTGGCACATTGTTAAGGAAATATATCTATATGTGAAGGTAGCTTTTTGTGCTGCAATCTTTCCAAAATCCAGCATAAAGGTTGACTTGCAATAATTCTGTCTGTGTCACAATGTAAACTATAAGCAACGGCAAAGCATTTATTCacagcaaaacataaaataaaatctatataaaata

Function

symbol description
inab Acts upstream of or within neuron projection morphogenesis. Predicted to be located in neurofilament. Is expressed in nervous system; neural tube; and optic vesicle. Orthologous to human INA (internexin neuronal intermediate filament protein alpha).

GO:

id name namespace
GO:0048812 neuron projection morphogenesis biological_process
GO:0007399 nervous system development biological_process
GO:0005882 intermediate filament cellular_component
GO:0005883 neurofilament cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-990415-83 Acts upstream of or within neuron projection morphogenesis. Predicted to be located in neurofilament. Is expressed in nervous system; neural tube; and optic vesicle. Orthologous to human INA (internexin neuronal intermediate filament protein alpha).

Ensembl:

ensembl_id ENSDARG00000053248

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000648 True 1972 mRNA 0.50 3 31864404 31867717

Neighbor

gene id symbol gene type direction distance location
XLOC_000377 cnnm2b coding upstream 65045 31725154 ~ 31799359 (+)
XLOC_000376 as3mt coding upstream 141529 31706668 ~ 31722875 (+)
XLOC_000375 wbp1lb coding upstream 164449 31674297 ~ 31699955 (+)
XLOC_000374 poll coding upstream 192061 31657842 ~ 31672343 (+)
XLOC_000373 fgf8b coding upstream 194503 31638274 ~ 31669901 (+)
XLOC_000379 anos1a coding downstream 75244 31942961 ~ 31979510 (+)
XLOC_000380 NA coding downstream 142545 32010262 ~ 32011794 (+)
XLOC_000381 NA coding downstream 144163 32011880 ~ 32012378 (+)
XLOC_000382 BX901898.2 coding downstream 145971 32013688 ~ 32014487 (+)
XLOC_000383 BX901898.1 coding downstream 149720 32017437 ~ 32018115 (+)
XLOC_000371 CT573247.1 non-coding upstream 343432 31519239 ~ 31520972 (+)
XLOC_000370 NA non-coding upstream 505085 31354585 ~ 31359319 (+)
XLOC_000369 NA non-coding upstream 719877 31141119 ~ 31144527 (+)
XLOC_000365 BX548015.2 non-coding upstream 1004880 30853969 ~ 30859524 (+)
XLOC_000361 BX255890.2 non-coding upstream 1636899 30227391 ~ 30227505 (+)
XLOC_000386 CU462859.1 non-coding downstream 646272 32513989 ~ 32514104 (+)
XLOC_000388 CU915272.1 non-coding downstream 838392 32706109 ~ 32706227 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000049_01984867_01987314 INAB coding CI01000049 null 1984817 ~ 1988047 (+)