Gene
RNA
| Item | Value |
|---|---|
| gene id | G1876015 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 50022764 ~ 50022974 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| sorting nexin-27-like |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2146221 | True | 211 | lncRNA | 0.39 | 1 | 50022764 | 50022974 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502940 | LOC106610375 | coding | downstream | 2973 | 50010376 ~ 50019792 (-) |
| LOC110502930 | LOC106610386 | coding | downstream | 35874 | 49975399 ~ 49986890 (-) |
| LOC110502943 | NA | coding | downstream | 55729 | 49945844 ~ 49967035 (-) |
| LOC110503141 | LOC106610139 | coding | downstream | 167681 | 49732121 ~ 49855083 (-) |
| LOC110502932 | LOC106610076 | coding | downstream | 388900 | 49591993 ~ 49633864 (-) |
| LOC110502925 | LOC106610356 | coding | upstream | 2720 | 50025694 ~ 50043368 (-) |
| LOC110502931 | LOC106610342 | coding | upstream | 29860 | 50052834 ~ 50067792 (-) |
| LOC110502926 | LOC106610323 | coding | upstream | 55633 | 50077523 ~ 50101700 (-) |
| LOC110503023 | LOC106610308 | coding | upstream | 87446 | 50110420 ~ 50146309 (-) |
| LOC118943861 | NA | coding | upstream | 168550 | 50191524 ~ 50194275 (-) |
| G1876013 | NA | non-coding | downstream | 1276 | 50021145 ~ 50021488 (-) |
| G1876012 | NA | non-coding | downstream | 2326 | 50020230 ~ 50020438 (-) |
| G1876007 | NA | non-coding | downstream | 12571 | 50009993 ~ 50010193 (-) |
| G1876016 | NA | non-coding | upstream | 7477 | 50030451 ~ 50030675 (-) |
| G1876017 | NA | non-coding | upstream | 8825 | 50031799 ~ 50032017 (-) |
| G1876021 | NA | non-coding | upstream | 22659 | 50045633 ~ 50045943 (-) |
| G1875988 | NA | non-coding | upstream | 25893 | 50048867 ~ 50049071 (-) |
| G1875310 | NA | other | downstream | 715629 | 49304519 ~ 49307135 (-) |
| LOC110502911 | LOC106609787 | other | downstream | 1285482 | 48729606 ~ 48838648 (-) |
| LOC110503133 | LOC106609742 | other | downstream | 1380893 | 48637596 ~ 48641914 (-) |
| LOC110502901 | NA | other | downstream | 1501092 | 48520679 ~ 48528302 (-) |
| G1875984 | NA | other | upstream | 28317 | 50051291 ~ 50052791 (-) |
| LOC110503025 | LOC106610281 | other | upstream | 189076 | 50212050 ~ 50253496 (-) |
| G1876460 | NA | other | upstream | 432347 | 50455321 ~ 50455709 (-) |
| G1876522 | NA | other | upstream | 743056 | 50766030 ~ 50770317 (-) |
| G1877873 | LOC106610563 | other | upstream | 1735188 | 51758162 ~ 51765341 (-) |
