Gene
RNA
| Item | Value |
|---|---|
| gene id | G1875755 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 50125690 ~ 50125924 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2145931 | True | 235 | lncRNA | 0.37 | 1 | 50125690 | 50125924 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503022 | LOC106610329 | coding | upstream | 46066 | 50069354 ~ 50079624 (+) |
| LOC110502942 | LOC106610367 | coding | upstream | 102085 | 50019520 ~ 50023605 (+) |
| LOC110502928 | LOC106610381 | coding | upstream | 116551 | 50004825 ~ 50009139 (+) |
| tepsin | LOC106610392 | coding | upstream | 151582 | 49965176 ~ 49974108 (+) |
| LOC110503021 | LOC106610401 | coding | upstream | 162797 | 49909824 ~ 49962893 (+) |
| LOC110503024 | LOC106610298 | coding | downstream | 39291 | 50165215 ~ 50176914 (+) |
| LOC110502945 | csn1 | coding | downstream | 127712 | 50253636 ~ 50276843 (+) |
| LOC118943895 | NA | coding | downstream | 139970 | 50265894 ~ 50267563 (+) |
| LOC110502948 | LOC106610249 | coding | downstream | 332033 | 50457957 ~ 50487761 (+) |
| LOC110503029 | LOC106610476 | coding | downstream | 1186950 | 51312874 ~ 51709405 (+) |
| G1875750 | NA | non-coding | upstream | 3710 | 50121722 ~ 50121980 (+) |
| G1875733 | NA | non-coding | upstream | 24572 | 50100264 ~ 50101118 (+) |
| G1875731 | NA | non-coding | upstream | 27719 | 50097537 ~ 50097971 (+) |
| G1875725 | NA | non-coding | upstream | 38681 | 50086143 ~ 50087009 (+) |
| G1875691 | NA | non-coding | upstream | 74601 | 50050111 ~ 50051089 (+) |
| G1875758 | NA | non-coding | downstream | 3586 | 50129510 ~ 50129727 (+) |
| G1875760 | NA | non-coding | downstream | 4930 | 50130854 ~ 50131184 (+) |
| G1875787 | NA | non-coding | downstream | 66488 | 50192412 ~ 50193180 (+) |
| G1875802 | NA | non-coding | downstream | 103239 | 50229163 ~ 50230535 (+) |
| G1875808 | NA | non-coding | downstream | 111508 | 50237432 ~ 50237994 (+) |
| G1875689 | LOC100136012 | other | upstream | 75654 | 50049186 ~ 50050036 (+) |
| G1875567 | NA | other | upstream | 372252 | 49753088 ~ 49753438 (+) |
| G1873717 | LOC106609588 | other | upstream | 2082858 | 48040594 ~ 48042832 (+) |
| LOC110502893 | LOC106609573 | other | upstream | 2109207 | 48007176 ~ 48021129 (+) |
| LOC110502887 | NA | other | upstream | 2654887 | 47467771 ~ 47470803 (+) |
| G1875816 | NA | other | downstream | 117636 | 50243560 ~ 50244524 (+) |
| G1876374 | Rpl38 | other | downstream | 640175 | 50766099 ~ 50770263 (+) |
| G1877363 | NA | other | downstream | 1332783 | 51458707 ~ 51459345 (+) |
| G1878346 | LOC100136012 | other | downstream | 2099896 | 52225820 ~ 52226189 (+) |
