G1876077


Basic Information

Item Value
gene id G1876077
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 50237442 ~ 50238234 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2146295
GTAAGGGAcaataaggagagagagggaggaggaaatgAAAGAGGAACCATGGTTGAATCAAGCAGGGTAAagtagagaaatagagaaagcCATGGTTGAGGCGAGCAGGGTAAAGGAGAGCGAGAAAGCCATGGTTGAGGCTAGCAGGGTAAAGGAGAGCGAGAAAGCCATGGTTGAGGCTAgcagggtaaaggagagagagagagagaaagccatggTTGAGGGGAGCAGggtaaaggggagagagagagagagagagaaagccatggTTGAGGCTAGCAGggtaaaggggagagagagagagagagagagaaagccatggTTGAGGCTAGCAGGgtaaaggagagagcgagagagagagaaagccatggTTGAGGCTAGCatggtaaaggagagagagagagagaaagccatggTTGAGGCTAGCAgggtaaatgagagagagagagagaaagccatggTTGAGGCTAGCAGGgtaaaggagagatagagagagagagaaagccatggTTGAGGCTAgcagggtaaaggagagagagagagagagagagaaagccatggTTGAGGCTAGCAGGgtaaaggagagagagagagagagagagaaagccatggTTGAGGCTAgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2146295 True 623 lncRNA 0.51 2 50237442 50238234

Neighbor

gene id symbol gene type direction distance location
LOC118943861 NA coding downstream 43167 50191524 ~ 50194275 (-)
LOC110503023 LOC106610308 coding downstream 91133 50110420 ~ 50146309 (-)
LOC110502926 LOC106610323 coding downstream 135742 50077523 ~ 50101700 (-)
LOC110502931 LOC106610342 coding downstream 169650 50052834 ~ 50067792 (-)
LOC110502925 LOC106610356 coding downstream 194074 50025694 ~ 50043368 (-)
LOC110503026 LOC106610130 coding upstream 58416 50296650 ~ 50297792 (-)
LOC110502946 LOC106610271 coding upstream 121049 50359283 ~ 50410527 (-)
LOC110502949 csnk1d coding upstream 257589 50495823 ~ 50513514 (-)
LOC110503027 LOC106610207 coding upstream 282680 50520914 ~ 50593400 (-)
dnai2b LOC106610195 coding upstream 356512 50594746 ~ 50610431 (-)
G1876076 NA non-coding downstream 99 50236255 ~ 50237343 (-)
G1875988 NA non-coding downstream 188371 50048867 ~ 50049071 (-)
G1876021 NA non-coding downstream 191499 50045633 ~ 50045943 (-)
G1876017 NA non-coding downstream 205425 50031799 ~ 50032017 (-)
G1876052 NA non-coding upstream 29200 50267434 ~ 50269466 (-)
G1876050 NA non-coding upstream 37487 50275721 ~ 50276830 (-)
G1876099 NA non-coding upstream 54447 50292681 ~ 50293359 (-)
G1876101 NA non-coding upstream 56057 50294291 ~ 50294641 (-)
G1876102 NA non-coding upstream 56869 50295103 ~ 50295545 (-)
LOC110503025 LOC106610281 other downstream 22938 50212050 ~ 50253496 (-)
G1875984 NA other downstream 184651 50051291 ~ 50052791 (-)
LOC110503141 LOC106610139 other downstream 391114 49732121 ~ 49855083 (-)
G1875310 NA other downstream 930307 49304519 ~ 49307135 (-)
LOC110502911 LOC106609787 other downstream 1500160 48729606 ~ 48838648 (-)
G1876460 NA other upstream 217087 50455321 ~ 50455709 (-)
G1876522 NA other upstream 527796 50766030 ~ 50770317 (-)
G1877873 LOC106610563 other upstream 1519928 51758162 ~ 51765341 (-)
G1877882 NA other upstream 1554384 51792618 ~ 51792968 (-)
G1877986 NA other upstream 1676713 51914947 ~ 51915249 (-)

Expression


Co-expression Network