G1876050


Basic Information

Item Value
gene id G1876050
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 50275721 ~ 50276830 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2146268
CTTTTATTAGAATTTTTACATTGCAGAAAGTCTAAATTATTTTTCAAACCAAGAGGTACCAGATCCAGCCAAATATGTCCCAGAACAAAACAGTGCGGGATCCGGCTCAAATTAAGCACCGgcaactgatagatgcacactcACTACATGTTCATGCTTTTTAAATGTATGCAAATTGTAAAGCCTTTTGACTGTAATGTCTTTTTCTTTATATGTCGGACCCTAGTAATACTAGGCGTCACTATGGGGATCCGAATAAAACTAATCAAATCATAACATTGAAAGTCATTGCAATCTTCctcaaaaataatgttttattagTATCAGCATTCTGTGATTTAGTAGTCATAAATAAACAATGTTAAggaggggtctgtgtgtgtgtgtgtgagaaatcgGCTTATTGTGCAACTTGTAAAAAACACATATTGAGAGAAGACAAAATGTCCTGACCAAGCTTCTGATTATCAtacatatttattttaaaatcagATCTTGTGGACATTGGTTCttaggtatgtgtgtgttctgtttaaTCTTCAGTGGGTGAATTCAAAGTCTGTCATCATCAGAAAGAAAAATGAAAGCGAGGGAAGAAAGGTGCATCTCATACAAAGGACAAAAAGAGGACACTACTAAGAAGAGAgcgccacacacacagacacacgcagccTTCCCGCTATAACATTAACACACAGATTGCTCATCAAGTCTTCAGTCTACACAGACGATCACTTCTCACATGAACAAAGTCCTAggctgcatccaaaatgGCAGATGCAGCACTGAGTCGGAGGAGGAGCctcagagatggagggatggggtggaggGGTGCTAGTTCCCCCTGGCGGAACCCACTGACATGGTAACTTCCTGTAAGACAGAGGTCTCAGGGGAAtgttcacatgttggtgctcattcGTGATTGGCTGTTGGCAGAGTTAAGTTCGCCTTGGCTTCCCTCTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2146268 True 968 lncRNA 0.41 2 50275721 50276830

Neighbor

gene id symbol gene type direction distance location
LOC110503025 LOC106610281 coding downstream 22225 50212050 ~ 50253496 (-)
LOC118943861 NA coding downstream 81446 50191524 ~ 50194275 (-)
LOC110503023 LOC106610308 coding downstream 129412 50110420 ~ 50146309 (-)
LOC110502926 LOC106610323 coding downstream 174021 50077523 ~ 50101700 (-)
LOC110502931 LOC106610342 coding downstream 207929 50052834 ~ 50067792 (-)
LOC110503026 LOC106610130 coding upstream 19820 50296650 ~ 50297792 (-)
LOC110502946 LOC106610271 coding upstream 82453 50359283 ~ 50410527 (-)
LOC110502949 csnk1d coding upstream 218993 50495823 ~ 50513514 (-)
LOC110503027 LOC106610207 coding upstream 244084 50520914 ~ 50593400 (-)
dnai2b LOC106610195 coding upstream 317916 50594746 ~ 50610431 (-)
G1876052 NA non-coding downstream 6255 50267434 ~ 50269466 (-)
G1876077 NA non-coding downstream 37487 50237442 ~ 50238234 (-)
G1876076 NA non-coding downstream 38378 50236255 ~ 50237343 (-)
G1876099 NA non-coding upstream 15851 50292681 ~ 50293359 (-)
G1876101 NA non-coding upstream 17461 50294291 ~ 50294641 (-)
G1876102 NA non-coding upstream 18273 50295103 ~ 50295545 (-)
G1876132 NA non-coding upstream 39044 50315874 ~ 50316098 (-)
G1876144 NA non-coding upstream 46550 50323380 ~ 50334411 (-)
G1875984 NA other downstream 222930 50051291 ~ 50052791 (-)
LOC110503141 LOC106610139 other downstream 429393 49732121 ~ 49855083 (-)
G1875310 NA other downstream 968586 49304519 ~ 49307135 (-)
LOC110502911 LOC106609787 other downstream 1538439 48729606 ~ 48838648 (-)
G1876460 NA other upstream 178491 50455321 ~ 50455709 (-)
G1876522 NA other upstream 489200 50766030 ~ 50770317 (-)
G1877873 LOC106610563 other upstream 1481332 51758162 ~ 51765341 (-)
G1877882 NA other upstream 1515788 51792618 ~ 51792968 (-)
G1877986 NA other upstream 1638117 51914947 ~ 51915249 (-)

Expression


Co-expression Network