G1876102


Basic Information

Item Value
gene id G1876102
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 50295103 ~ 50295545 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2146320
ACCAATCTCCTACCATCTGCAGTTATTCCCATGAACTTTTCCAGtgatattttgttgttgtagaaAGTTCGCATAGAAAATAGATTCGACAACTGCTACGGTTCGTTTCCATGTAACAATCTTGTGtcgataaaaaaaaaactatagacGTAATGAtgtcacacaaaaaaacactttCACAAAAACCTACAGTGTCGAATAAAAATGAAGTGGTTGTTTCCATTTCCCATTTAGGCAAATTGTGCATTAATAAACTGGAAACAGCCTGTATTCCCCCCACTATTTGTTTTATGTCTCGGTTTGCCaggtgttgtgccgaaaatctTCCCCCTGACAGAATTATCCCCGCTCTTCGCGTGAACGCGCACACACTCAATGCTTCATTGATGCAATTTtcttgctagttgagatttctgctcTTCACTCCGTTGTCAGTTCAGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2146320 True 443 lncRNA 0.40 1 50295103 50295545

Neighbor

gene id symbol gene type direction distance location
LOC110503025 LOC106610281 coding downstream 41607 50212050 ~ 50253496 (-)
LOC118943861 NA coding downstream 100828 50191524 ~ 50194275 (-)
LOC110503023 LOC106610308 coding downstream 148794 50110420 ~ 50146309 (-)
LOC110502926 LOC106610323 coding downstream 193403 50077523 ~ 50101700 (-)
LOC110502931 LOC106610342 coding downstream 227311 50052834 ~ 50067792 (-)
LOC110503026 LOC106610130 coding upstream 1105 50296650 ~ 50297792 (-)
LOC110502946 LOC106610271 coding upstream 63738 50359283 ~ 50410527 (-)
LOC110502949 csnk1d coding upstream 200278 50495823 ~ 50513514 (-)
LOC110503027 LOC106610207 coding upstream 225369 50520914 ~ 50593400 (-)
dnai2b LOC106610195 coding upstream 299201 50594746 ~ 50610431 (-)
G1876101 NA non-coding downstream 462 50294291 ~ 50294641 (-)
G1876099 NA non-coding downstream 1744 50292681 ~ 50293359 (-)
G1876050 NA non-coding downstream 18273 50275721 ~ 50276830 (-)
G1876052 NA non-coding downstream 25637 50267434 ~ 50269466 (-)
G1876077 NA non-coding downstream 56869 50237442 ~ 50238234 (-)
G1876132 NA non-coding upstream 20329 50315874 ~ 50316098 (-)
G1876144 NA non-coding upstream 27835 50323380 ~ 50334411 (-)
G1876176 NA non-coding upstream 58582 50354127 ~ 50354474 (-)
G1876425 NA non-coding upstream 68811 50364356 ~ 50367289 (-)
G1876429 NA non-coding upstream 98926 50394471 ~ 50394824 (-)
G1875984 NA other downstream 242312 50051291 ~ 50052791 (-)
LOC110503141 LOC106610139 other downstream 448775 49732121 ~ 49855083 (-)
G1875310 NA other downstream 987968 49304519 ~ 49307135 (-)
LOC110502911 LOC106609787 other downstream 1557821 48729606 ~ 48838648 (-)
G1876460 NA other upstream 159776 50455321 ~ 50455709 (-)
G1876522 NA other upstream 470485 50766030 ~ 50770317 (-)
G1877873 LOC106610563 other upstream 1462617 51758162 ~ 51765341 (-)
G1877882 NA other upstream 1497073 51792618 ~ 51792968 (-)
G1877986 NA other upstream 1619402 51914947 ~ 51915249 (-)

Expression


Co-expression Network