G1876165


Basic Information

Item Value
gene id G1876165
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 50346727 ~ 50347250 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2146395
attggattcaggttctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctctgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagggtgatgagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatttgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaactacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgac

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2146395 True 524 lncRNA 0.42 1 50346727 50347250

Neighbor

gene id symbol gene type direction distance location
LOC110502945 csn1 coding upstream 69884 50253636 ~ 50276843 (+)
LOC118943895 NA coding upstream 79164 50265894 ~ 50267563 (+)
LOC110503024 LOC106610298 coding upstream 169813 50165215 ~ 50176914 (+)
LOC110503022 LOC106610329 coding upstream 267103 50069354 ~ 50079624 (+)
LOC110502942 LOC106610367 coding upstream 323122 50019520 ~ 50023605 (+)
LOC110502948 LOC106610249 coding downstream 110707 50457957 ~ 50487761 (+)
LOC110503029 LOC106610476 coding downstream 965624 51312874 ~ 51709405 (+)
LOC110502954 LOC106610563 coding downstream 1378580 51725830 ~ 51760953 (+)
LOC110503031 LOC106583559 coding downstream 1608922 51956172 ~ 52016294 (+)
LOC110502958 LOC106610530 coding downstream 2178324 52525574 ~ 52587888 (+)
G1876136 NA non-coding upstream 28174 50318323 ~ 50318553 (+)
G1876125 NA non-coding upstream 35251 50311261 ~ 50311476 (+)
G1876120 NA non-coding upstream 38480 50307990 ~ 50308247 (+)
G1876119 NA non-coding upstream 40356 50306147 ~ 50306371 (+)
G1876118 NA non-coding upstream 41599 50304909 ~ 50305128 (+)
G1876261 NA non-coding downstream 145071 50492321 ~ 50492684 (+)
G1876272 NA non-coding downstream 177750 50525000 ~ 50525760 (+)
G1876311 NA non-coding downstream 247012 50594262 ~ 50598012 (+)
G1876319 NA non-coding downstream 259671 50606921 ~ 50608075 (+)
G1876377 NA non-coding downstream 393853 50741103 ~ 50741672 (+)
G1875816 NA other upstream 102203 50243560 ~ 50244524 (+)
G1875689 LOC100136012 other upstream 296691 50049186 ~ 50050036 (+)
G1875567 NA other upstream 593289 49753088 ~ 49753438 (+)
G1873717 LOC106609588 other upstream 2303895 48040594 ~ 48042832 (+)
LOC110502893 LOC106609573 other upstream 2330244 48007176 ~ 48021129 (+)
G1876374 Rpl38 other downstream 418849 50766099 ~ 50770263 (+)
G1877363 NA other downstream 1111457 51458707 ~ 51459345 (+)
G1878346 LOC100136012 other downstream 1878570 52225820 ~ 52226189 (+)
G1878893 NA other downstream 2478238 52825488 ~ 52836634 (+)

Expression


Co-expression Network