Gene
RNA
| Item | Value |
|---|---|
| gene id | G1876460 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 50455321 ~ 50455709 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: arabinogalactan protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2146732 | True | 281 | TUCP | 0.64 | 2 | 50455321 | 50455709 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502946 | LOC106610271 | coding | downstream | 44794 | 50359283 ~ 50410527 (-) |
| LOC110503026 | LOC106610130 | coding | downstream | 157529 | 50296650 ~ 50297792 (-) |
| LOC110503025 | LOC106610281 | coding | downstream | 201825 | 50212050 ~ 50253496 (-) |
| LOC118943861 | NA | coding | downstream | 261046 | 50191524 ~ 50194275 (-) |
| LOC110503023 | LOC106610308 | coding | downstream | 309012 | 50110420 ~ 50146309 (-) |
| LOC110502949 | csnk1d | coding | upstream | 40114 | 50495823 ~ 50513514 (-) |
| LOC110503027 | LOC106610207 | coding | upstream | 65205 | 50520914 ~ 50593400 (-) |
| dnai2b | LOC106610195 | coding | upstream | 139037 | 50594746 ~ 50610431 (-) |
| LOC110502951 | LOC106610147 | coding | upstream | 159320 | 50615029 ~ 50766231 (-) |
| LOC110502952 | NA | coding | upstream | 310582 | 50766291 ~ 50770335 (-) |
| G1876444 | NA | non-coding | downstream | 20253 | 50433201 ~ 50435068 (-) |
| G1876429 | NA | non-coding | downstream | 60497 | 50394471 ~ 50394824 (-) |
| G1876425 | NA | non-coding | downstream | 88032 | 50364356 ~ 50367289 (-) |
| G1876176 | NA | non-coding | downstream | 100847 | 50354127 ~ 50354474 (-) |
| G1876144 | NA | non-coding | downstream | 120910 | 50323380 ~ 50334411 (-) |
| G1876461 | NA | non-coding | upstream | 61 | 50455770 ~ 50456624 (-) |
| G1876423 | LOC106610249 | non-coding | upstream | 30137 | 50485846 ~ 50489522 (-) |
| G1876501 | NA | non-coding | upstream | 93408 | 50549117 ~ 50551680 (-) |
| G1876520 | NA | non-coding | upstream | 117809 | 50573518 ~ 50574006 (-) |
| G1876585 | NA | non-coding | upstream | 263799 | 50719508 ~ 50719823 (-) |
| G1875984 | NA | other | downstream | 402530 | 50051291 ~ 50052791 (-) |
| LOC110503141 | LOC106610139 | other | downstream | 608993 | 49732121 ~ 49855083 (-) |
| G1875310 | NA | other | downstream | 1148186 | 49304519 ~ 49307135 (-) |
| LOC110502911 | LOC106609787 | other | downstream | 1718039 | 48729606 ~ 48838648 (-) |
| G1876522 | NA | other | upstream | 310321 | 50766030 ~ 50770317 (-) |
| G1877873 | LOC106610563 | other | upstream | 1302453 | 51758162 ~ 51765341 (-) |
| G1877882 | NA | other | upstream | 1336909 | 51792618 ~ 51792968 (-) |
| G1877986 | NA | other | upstream | 1459238 | 51914947 ~ 51915249 (-) |
| G1878014 | NA | other | upstream | 1479015 | 51934724 ~ 51935044 (-) |
