G1876646



Basic Information


Item Value
gene id G1876646
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 50808036 ~ 50808262 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2146932
TAACAAGAGCACTCACATCCCAGCTCACAACCACAAAGGGTTAtactgtgttccaaatgacaccctattcccataTACAGCACATTTCTTTTGAAGAAAAAGCACTACAAAAGTTGCTcactatatacggaatagggtgccattagggatgaaTCCTTACTCATCTCCTAATCCCTGAACAGTGGGAGAACAAAATTGATGGAGGCATAACCATGGCGACCGAGAGG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2146932 True 227 lncRNA 0.43 1 50808036 50808262

Neighbor


gene id symbol gene type direction distance location
LOC110502952 NA coding downstream 37701 50766291 ~ 50770335 (-)
LOC110502951 LOC106610147 coding downstream 41805 50615029 ~ 50766231 (-)
dnai2b LOC106610195 coding downstream 197605 50594746 ~ 50610431 (-)
LOC110503027 LOC106610207 coding downstream 214636 50520914 ~ 50593400 (-)
LOC110502949 csnk1d coding downstream 294522 50495823 ~ 50513514 (-)
LOC110502956 LOC106610551 coding upstream 994284 51802546 ~ 51813619 (-)
LOC110503030 tekt3 coding upstream 1020281 51828543 ~ 51842849 (-)
LOC118943832 NA coding upstream 1137176 51945438 ~ 51953168 (-)
LOC110502957 LOC106610540 coding upstream 1463143 52271405 ~ 52315778 (-)
trnag-ccc-6 NA coding upstream 1958587 52766849 ~ 52766919 (-)
G1876639 NA non-coding downstream 2629 50805200 ~ 50805407 (-)
G1876595 NA non-coding downstream 66459 50740177 ~ 50741577 (-)
G1876585 NA non-coding downstream 88213 50719508 ~ 50719823 (-)
G1876520 NA non-coding downstream 234030 50573518 ~ 50574006 (-)
G1876501 NA non-coding downstream 256356 50549117 ~ 50551680 (-)
G1876664 NA non-coding upstream 13681 50821943 ~ 50822155 (-)
G1876856 NA non-coding upstream 145546 50953808 ~ 50956839 (-)
G1876916 NA non-coding upstream 206778 51015040 ~ 51015241 (-)
G1876962 NA non-coding upstream 244819 51053081 ~ 51053328 (-)
G1876982 NA non-coding upstream 263847 51072109 ~ 51073031 (-)
G1876522 NA other downstream 37719 50766030 ~ 50770317 (-)
G1876460 NA other downstream 352327 50455321 ~ 50455709 (-)
LOC110503025 LOC106610281 other downstream 593532 50212050 ~ 50253496 (-)
G1875984 NA other downstream 755245 50051291 ~ 50052791 (-)
LOC110503141 LOC106610139 other downstream 961708 49732121 ~ 49855083 (-)
G1877873 LOC106610563 other upstream 949900 51758162 ~ 51765341 (-)
G1877882 NA other upstream 984356 51792618 ~ 51792968 (-)
G1877986 NA other upstream 1106685 51914947 ~ 51915249 (-)
G1878014 NA other upstream 1126462 51934724 ~ 51935044 (-)
G1878101 NA other upstream 1228334 52036596 ~ 52037750 (-)

Expression



Co-expression Network