G1876962



Basic Information


Item Value
gene id G1876962
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 51053081 ~ 51053328 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2147264
GGAATATCAACATAATTTTTAACAACGTAGGCTATGAAGCAACATTTGGTTTTCCATCAAAATAACAATTCTTGCGAGTTTAAGAATATGTCGCAAGAGAAAATATAAATCGCCCTTATTATACTATCCAGATAATTTCCCATCAATGAATGTCGATTTAACTTGTTTTGACTGCTATGATTTAGCAGGAGGTGTGGTATGTCCAATGTACCACGGCTATGGGTTTTTCTTAAGAaatagcccttagc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2147264 True 248 lncRNA 0.35 1 51053081 51053328

Neighbor


gene id symbol gene type direction distance location
LOC110502952 NA coding downstream 282746 50766291 ~ 50770335 (-)
LOC110502951 LOC106610147 coding downstream 286850 50615029 ~ 50766231 (-)
dnai2b LOC106610195 coding downstream 442650 50594746 ~ 50610431 (-)
LOC110503027 LOC106610207 coding downstream 459681 50520914 ~ 50593400 (-)
LOC110502949 csnk1d coding downstream 539567 50495823 ~ 50513514 (-)
LOC110502956 LOC106610551 coding upstream 749218 51802546 ~ 51813619 (-)
LOC110503030 tekt3 coding upstream 775215 51828543 ~ 51842849 (-)
LOC118943832 NA coding upstream 892110 51945438 ~ 51953168 (-)
LOC110502957 LOC106610540 coding upstream 1218077 52271405 ~ 52315778 (-)
trnag-ccc-6 NA coding upstream 1713521 52766849 ~ 52766919 (-)
G1876916 NA non-coding downstream 37840 51015040 ~ 51015241 (-)
G1876856 NA non-coding downstream 96242 50953808 ~ 50956839 (-)
G1876664 NA non-coding downstream 230926 50821943 ~ 50822155 (-)
G1876646 NA non-coding downstream 244819 50808036 ~ 50808262 (-)
G1876639 NA non-coding downstream 247674 50805200 ~ 50805407 (-)
G1876982 NA non-coding upstream 18781 51072109 ~ 51073031 (-)
G1877089 NA non-coding upstream 114336 51167664 ~ 51167895 (-)
G1877131 NA non-coding upstream 139621 51192949 ~ 51193169 (-)
G1877212 NA non-coding upstream 197735 51251063 ~ 51251420 (-)
G1877217 NA non-coding upstream 201900 51255228 ~ 51255495 (-)
G1876522 NA other downstream 282764 50766030 ~ 50770317 (-)
G1876460 NA other downstream 597372 50455321 ~ 50455709 (-)
LOC110503025 LOC106610281 other downstream 838577 50212050 ~ 50253496 (-)
G1875984 NA other downstream 1000290 50051291 ~ 50052791 (-)
LOC110503141 LOC106610139 other downstream 1206753 49732121 ~ 49855083 (-)
G1877873 LOC106610563 other upstream 704834 51758162 ~ 51765341 (-)
G1877882 NA other upstream 739290 51792618 ~ 51792968 (-)
G1877986 NA other upstream 861619 51914947 ~ 51915249 (-)
G1878014 NA other upstream 881396 51934724 ~ 51935044 (-)
G1878101 NA other upstream 983268 52036596 ~ 52037750 (-)

Expression



Co-expression Network