Gene
RNA
| Item | Value |
|---|---|
| gene id | G1876980 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 51071440 ~ 51071641 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2147283 | True | 202 | lncRNA | 0.43 | 1 | 51071440 | 51071641 |
51,069,200
51,069,600
51,070,000
51,070,400
51,070,800
51,071,200
51,071,600
51,072,000
51,072,400
51,072,800
51,073,200
51,073,600
NC_048587.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502948 | LOC106610249 | coding | upstream | 583679 | 50457957 ~ 50487761 (+) |
| LOC110502945 | csn1 | coding | upstream | 794597 | 50253636 ~ 50276843 (+) |
| LOC118943895 | NA | coding | upstream | 803877 | 50265894 ~ 50267563 (+) |
| LOC110503024 | LOC106610298 | coding | upstream | 894526 | 50165215 ~ 50176914 (+) |
| LOC110503022 | LOC106610329 | coding | upstream | 991816 | 50069354 ~ 50079624 (+) |
| LOC110503029 | LOC106610476 | coding | downstream | 241233 | 51312874 ~ 51709405 (+) |
| LOC110502954 | LOC106610563 | coding | downstream | 654189 | 51725830 ~ 51760953 (+) |
| LOC110503031 | LOC106583559 | coding | downstream | 884531 | 51956172 ~ 52016294 (+) |
| LOC110502958 | LOC106610530 | coding | downstream | 1453933 | 52525574 ~ 52587888 (+) |
| LOC110502959 | LOC106610521 | coding | downstream | 1695449 | 52767090 ~ 52773492 (+) |
| G1876975 | NA | non-coding | upstream | 2907 | 51068289 ~ 51068533 (+) |
| G1876964 | NA | non-coding | upstream | 14294 | 51056860 ~ 51057146 (+) |
| G1876950 | NA | non-coding | upstream | 30476 | 51040751 ~ 51040964 (+) |
| G1876929 | NA | non-coding | upstream | 41742 | 51029339 ~ 51029698 (+) |
| G1876921 | NA | non-coding | upstream | 49495 | 51021742 ~ 51021945 (+) |
| G1876981 | NA | non-coding | downstream | 610 | 51072251 ~ 51073045 (+) |
| G1877101 | NA | non-coding | downstream | 102049 | 51173690 ~ 51173946 (+) |
| G1877103 | NA | non-coding | downstream | 105125 | 51176766 ~ 51176965 (+) |
| G1877144 | NA | non-coding | downstream | 132571 | 51204212 ~ 51204440 (+) |
| G1877145 | NA | non-coding | downstream | 133289 | 51204930 ~ 51205146 (+) |
| G1876374 | Rpl38 | other | upstream | 301177 | 50766099 ~ 50770263 (+) |
| G1875816 | NA | other | upstream | 826916 | 50243560 ~ 50244524 (+) |
| G1875689 | LOC100136012 | other | upstream | 1021404 | 50049186 ~ 50050036 (+) |
| G1875567 | NA | other | upstream | 1318002 | 49753088 ~ 49753438 (+) |
| G1873717 | LOC106609588 | other | upstream | 3028608 | 48040594 ~ 48042832 (+) |
| G1877363 | NA | other | downstream | 387066 | 51458707 ~ 51459345 (+) |
| G1878346 | LOC100136012 | other | downstream | 1154179 | 52225820 ~ 52226189 (+) |
| G1878893 | NA | other | downstream | 1753847 | 52825488 ~ 52836634 (+) |
| G1878894 | LOC106610502 | other | downstream | 1786227 | 52857868 ~ 52860635 (+) |
