Gene
RNA
| Item | Value |
|---|---|
| gene id | G1877144 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 51204212 ~ 51204440 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2147456 | True | 229 | lncRNA | 0.48 | 1 | 51204212 | 51204440 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502948 | LOC106610249 | coding | upstream | 716451 | 50457957 ~ 50487761 (+) |
| LOC110502945 | csn1 | coding | upstream | 927369 | 50253636 ~ 50276843 (+) |
| LOC118943895 | NA | coding | upstream | 936649 | 50265894 ~ 50267563 (+) |
| LOC110503024 | LOC106610298 | coding | upstream | 1027298 | 50165215 ~ 50176914 (+) |
| LOC110503022 | LOC106610329 | coding | upstream | 1124588 | 50069354 ~ 50079624 (+) |
| LOC110503029 | LOC106610476 | coding | downstream | 108434 | 51312874 ~ 51709405 (+) |
| LOC110502954 | LOC106610563 | coding | downstream | 521390 | 51725830 ~ 51760953 (+) |
| LOC110503031 | LOC106583559 | coding | downstream | 751732 | 51956172 ~ 52016294 (+) |
| LOC110502958 | LOC106610530 | coding | downstream | 1321134 | 52525574 ~ 52587888 (+) |
| LOC110502959 | LOC106610521 | coding | downstream | 1562650 | 52767090 ~ 52773492 (+) |
| G1877103 | NA | non-coding | upstream | 27247 | 51176766 ~ 51176965 (+) |
| G1877101 | NA | non-coding | upstream | 30266 | 51173690 ~ 51173946 (+) |
| G1876981 | NA | non-coding | upstream | 131167 | 51072251 ~ 51073045 (+) |
| G1876980 | NA | non-coding | upstream | 132571 | 51071440 ~ 51071641 (+) |
| G1876975 | NA | non-coding | upstream | 135679 | 51068289 ~ 51068533 (+) |
| G1877145 | NA | non-coding | downstream | 490 | 51204930 ~ 51205146 (+) |
| G1877249 | NA | non-coding | downstream | 74583 | 51279023 ~ 51279308 (+) |
| G1877272 | NA | non-coding | downstream | 103203 | 51307643 ~ 51308601 (+) |
| G1877304 | NA | non-coding | downstream | 169468 | 51373908 ~ 51374238 (+) |
| G1877353 | NA | non-coding | downstream | 239902 | 51444342 ~ 51444578 (+) |
| G1876374 | Rpl38 | other | upstream | 433949 | 50766099 ~ 50770263 (+) |
| G1875816 | NA | other | upstream | 959688 | 50243560 ~ 50244524 (+) |
| G1875689 | LOC100136012 | other | upstream | 1154176 | 50049186 ~ 50050036 (+) |
| G1875567 | NA | other | upstream | 1450774 | 49753088 ~ 49753438 (+) |
| G1873717 | LOC106609588 | other | upstream | 3161380 | 48040594 ~ 48042832 (+) |
| G1877363 | NA | other | downstream | 254267 | 51458707 ~ 51459345 (+) |
| G1878346 | LOC100136012 | other | downstream | 1021380 | 52225820 ~ 52226189 (+) |
| G1878893 | NA | other | downstream | 1621048 | 52825488 ~ 52836634 (+) |
| G1878894 | LOC106610502 | other | downstream | 1653428 | 52857868 ~ 52860635 (+) |
