XLOC_037815


Basic Information

Item Value
gene id XLOC_037815
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 23697064 ~ 23700635 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075348
TTTCAGCCGCCGATTTAGCGCGCCCGCTCTTCAACTTGTGATGCTTAGTGCAAACCTTTGGCACCTGCTAACTCCCTGCTAACGAGGTAAGTCTGTTTGACAACACGGTTCTACActaaaagtacatttttacagAATCAGTATTAGCGATGTTGAGTTGCAATTTCTGTGGCAAGTCAGTCAAATCATTGAGGGCTTATGTAATACATTGCAAACTTCACCGAAATGAACCGCGTTTATTTAAGTGCTTTGCAGCCGAATGCAAACAGACTTTCTGTACATATGCATCGCTTAAGGCTCATTTTTACAGAAAACATAACGTAAATGCGCCTGTTAACGTTGCTGTCGGGACAGATGTTATGCCTATTAAATGTGCAATGGCGTTATGTGATCGACAGTGTGAAGATGCTAAATCTCTAATAGCACACTTGAAAGACCACATTGTAGAAGGACGTGTTGTGAGTTGTCCAGTAAGAGGATGCACAGATGCTTTTAAAGTTAAATCTTCCTTTACCTCCCACATGTCACGGAAACACAAACATTTCACAGAAAGCACAATTAGTGACTTGTACAGAGACTCGTCGGCTTATCAGTCATCTTCACAATCTGTAACAACCGAATTAACGTCACATGACTGTGGCCATGAATTTGAATGTGATGTAGATACATCCGACGATTTCAACGatctttttcttaaaaatatttgtttattttacttaaaactgCAAGGGCAGCTCTTAGTGCCTGATTCAACCACACAGAACATTGTTGAGGAGATTCAAAATATACACGAGTTGGGTCAGACATATACTTTAAGTAAACTTGCTTCACAGCTAAAGAATGAAACATCCTTAACAGAAGATGAGATCACCAAAATTTGTCAGTCTGTCAAGGAATCTGATCTGTTTTCTGCATGTCATACAGGGCCAATGAGGACTGCACACACAAGAGCTCAGTGtttcaaaaaaaatttcaattatGTGGAGCCTAAGACTGTTTTGTTAGGAAGGGATGAGAACAGAAAAGATAGGTTTGCCTATTATGTGCCAGTCAAAGAGACTTTAAAATGCTTATTGCAGTCTGATATGTGGCAGGATTGTATGTCTGAGGAGCACCCCACTGACACACCCACAGATGTTTTAACTGATGTTACTGATGGCCAGATGTTCAAATCAAATGAATTTTTTGTTCAGAATCCATCAGGCCTAAAACTAGTACTGTATCAGGATGCATTTGAAGTTGTTAATCCTTTAGGCTCTGCAAAGACAAGACATAAaatattagctgtttatttatcTGTAGCTAATTTGCCACTTCATGTAAGGTCAGACACAAACCACATGTCACTTGTTTTATTGTGCAGAGAAAAAGATTTTAAAGAATTTGGGCATGCTAAGGTGTTCTCTAATTTACTAGCAGACTTAAAGTATTTGGAGGAGAATGGAATTCCTGTTTCAGATGAAACCGTAGTAAAAGGAACGGTCTATTGCATTGCCGGCGATAATTTAGGATCCCACTGCATTGGTGGGTTCTCTGAAAATTTCAGCCGTGCAGAACATTTCTGTAGATATTGTCTAATTACTCGATCTGAATTTCAGGGTGATCCAAATCTGTGTGGACCAGCCCGGACAATTCAAAACTATAACTCAGCAATTGACCGCATCCAAGCAGAAGGAGCACAAGACGTGGAAGGAGTAAAATTCAGGTCAGAATTCAATACTTTGAAATACTTTAATGTGTGTCAGCCTGGTCTGCCACCTTGTGTGGGACACGACATATTTGAGGGTGTTTTGTCATATGATGTGGCACTGTATCTGAAatacttcataaaaaaaaaaaaaatggttcacaTACTCTACATTGAACAGGCGTATTAAACAGTTCAAATACTGTGCCTCAGATGCTGCTGCTAAGCCATGTGAGGTCAACCCTCAAGCAGGTAAGCTCACTGGAAATGCAATACAGAACTGGAATTTTTTAAGACTGATGCCTCTCATAATTGGTGATCAAGTGAAAGATGCAGCAGATGATGTGTGGCAGCTGACTCTGCAGCTGAAAGACATTGTGGACATGGTATGTGCTCAGAAAATCTCTGTTCCTCAAATTGCATATCTTGAAGTCCTTATTGAAGAGTATTTAGAATCCAGAACATCTATATTCCCCGAAACTAAGCTGAGACCTAAGCATCATTACTTACGCCATTATCCAGCACTGACTCTGAAATTTGGCCCCTTGATTAGATTGTGGACAATGCGTTTCGAAAGCAAGCATAGCTATTTCAAAAGATGTGCAAGAAATTTGAGGAATTTCAAAAACCTTGGTCTCACTTTGTCTAACAGACATCAGATGTTGCAGGCTTATTTATCAGCAGGCTCCAATAGACAGGCTGTTTTGCAAATTAAAGGTGGTTCTCCATTCTACTCAACACTGTACAGTAAAGGCATTCAGGATGCAGTCAGACAATATGGTTTCACTGATACCAACACAGCTGTCACAGTAGAAATGGTTTATAAAGGAACAGCCTACAAGAAAGGACAGTTCCTTGTCACAGGGTATACTGACTTGGTGGAATTTGGTGAACTTGTGCTCATTTTGGTAAAAAACAACACCGTTTATCTTTTGGTGTCAATGTACACAGCAGAATTCCTTCCTCAGTACCATGTGTACTCAGTGAGGAAAGACAATGAAATGATCCAGTGTTTTAACATCTGTGACATGATTGATTTCTATCCATTGGCTGCTTACATGAAAGATGGACAACGACTGGTTCCATTGAAACACAGTGTTTTGTCACACTAATTATGTCTTGTGCTGTCaaaattgaaagttttttttttctttttgtctttttacatttttttactcaGAATGGATGACGTAGAGCCAAGCAACATAAGCAGTGCCATTACTAATGTGTTACCAGACCTACCAACCTCAAATCTAAATATTGTATTGGAGACATTACAATCTTTAGGTGTGGGAGCCACTGaagatttacagtatattaagGAAGCTGATCTGCTCACAGTACTGAGACCAGTTCAAGCTAGAAAACTGTTGGCTGCATGGAAACAATCCAGTAAGTACATTATGCAGAAAGTTACATTTACTTGTAAGTtaagataaaaaaacaaatttcattctgtacatttaaatttcaatttattttacagCAGAGACAACTGAATTCCATAGTCAGTCAACATTGACCTCTCAAGTGTCCTCAGCGTGCTCCTCAGTCTCACTGTCTTCCTCACCCTCACCCTCACCATCACCCAGACACATGATTGCTACTGCAGATTGGGTCGACAGCTTCCAGATTCCATGGGAGAAGCTCCCAGAAGCCTTAATGCAGAGTTTGGAGAGAGGGAAAAGGCCAAGCTCAAAGTTAC
>TCONS_00075349
TACGAACATTTATACTATTCAAAGTGCATATTTAAATGTAGTAATAGCACCACTCAGTAAACGAAGGTGAACTGTCAACgttattttatatttcagttgGCGAAAAATGAGCGCGCACACCGTTTAAAATGGCGGAATAGCACCGCCCAATGAGCTAAAGTGAACTGTCGACATTTTATATTTCAGCCGCCGATTTAGCGCGCCCGCTCTTCAACTTGTGATGCTTAGTGCAAACCTTTGGCACCTGCTAACTCCCTGCTAACGAGGGTGATCCAAATCTGTGTGGACCAGCCCGGACAATTCAAAACTATAACTCAGCAATTGACCGCATCCAAGCAGAAGGAGCACAAGACGTGGAAGGAGTAAAATTCAGAATGGATGACGTAGAGCCAAGCAACATAAGCAGTGCCATTACTAATGTGTTACCAGACCTACCAACCTCAAATCTAAATATTGTATTGGAGACATTACAATCTTTAGGTGTGGGAGCCACTGaagatttacagtatattaagGAAGCTGATCTGCTCACAGTACTGAGACCAGTTCAAGCTAGAAAACTGTTGGCTGCATGGAAACAATCCACAGAGACAACTGAATTCCATAGTCAGTCAACATTGACCTCTCAAGTGTCCTCAGCGTGCTCCTCAGTCTCACTGTCTTCCTCACCCTCACCCTCACCATCACCCAGACACATGATTGCTACTGCAGATTGGGTCGACAGCTTCCAGATTCCATGGGAGAAGCTCCCAGAAGCCTTAATGCAGAGTTTGGAGAGAGGGAAAAGGCCAAGCTCAAAGTTAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075348 False 3392 lncRNA 0.40 1 23697064 23700455
TCONS_00075349 True 804 lncRNA 0.45 4 23697064 23700635

Neighbor

gene id symbol gene type direction distance location
XLOC_037814 NA coding downstream 2492 23691258 ~ 23694572 (-)
XLOC_037813 CR392363.2 coding downstream 308989 23383414 ~ 23388075 (-)
XLOC_037812 sh3bp4 coding downstream 313933 23369294 ~ 23383131 (-)
XLOC_037811 arl4cb coding downstream 338467 23356774 ~ 23358597 (-)
XLOC_037810 acmsd coding downstream 443194 23244292 ~ 23253870 (-)
XLOC_037816 ndufa10 coding upstream 39871 23740506 ~ 23747409 (-)
XLOC_037817 parp9 coding upstream 53640 23754275 ~ 23765480 (-)
XLOC_037818 esyt3 coding upstream 83221 23783856 ~ 23807032 (-)
XLOC_037819 wdfy2 coding upstream 112958 23813593 ~ 23824290 (-)
XLOC_037820 serpine3 coding upstream 142249 23842884 ~ 23850978 (-)
XLOC_037801 NA non-coding downstream 1070303 22618456 ~ 22626761 (-)
XLOC_037770 NA non-coding downstream 1879327 21816200 ~ 21817737 (-)
XLOC_037767 CR392366.1 non-coding downstream 2264403 21432545 ~ 21432661 (-)
XLOC_037823 NA non-coding upstream 207448 23908083 ~ 23909865 (-)
XLOC_037824 CR545476.2 non-coding upstream 211256 23911891 ~ 23912005 (-)
XLOC_037827 NA non-coding upstream 333117 24033752 ~ 24035345 (-)
XLOC_037830 NA non-coding upstream 468980 24169615 ~ 24186056 (-)
XLOC_037835 CR538727.1 non-coding upstream 634528 24335163 ~ 24335279 (-)

Expression


Co-expression Network