XLOC_037816 (ndufa10)


Basic Information

Item Value
gene id XLOC_037816
gene name ndufa10
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 23740506 ~ 23747409 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00074233
ACTGATGACGTACATCTCCCGCGACGCGAGATCCTTCGTCGACATTGAGGATCATTGAACTCGCTAGAAATCTTGTAGTTTCGCTATGGCGTTGCGGTTGTTTCGGCTAGTTGTGCCTTCGGGTGCAGCAGCTTGGAAACCTGTGTCGCCTATACAAACGgctAAAATCCACACAAGTGCTGTCAGAAACCTGCGTTATGGATGGTTGGCTTACGTTATGGGTGAGAGGGCAAGCTCCCGCTTCAAGGAAAACAGCAAAATTATTTCCATTGATGGCAACTTGGCGTCTGGAAAAGGAGTACTTGCACAAGAATTGGCCGAAAAGCTGGGAATGCTGTACATGCCCGAGCCAGACACACACTATGTGGACAAAATGACAAAGGAGAAAGTTCCTTTAGATCAGGCTTTTAATGGGAACTGCTCTCTGGAGAAGTTCTACTTGGAGCCCAAAGCCAGTGATGGAAACTCATACCGCCTGCAGGCTTGGATGTACCTCATGAGGCTTCTGCAGTACTCTgatgctgttgaacacctgctcaCGACAGGACAGGGAGTTATACTGGAACGATCTCCTTTTAGTGACGTTGTGTTTTTGGAGGCCATGTTCAAAGAAGGATACATCCGCAAGCAGTGCGTGAATCACTATAATGAGATTAAGGGTATCAGTATTTGTGAGTTTCTTCCCCCTCATCTTGTCATCTACGTGGACTCACCTGCTGAAGAGGTCCAGAAGAAGCTCAAAGCATCAGGAAAGCCATACCTACAGAATGTTCCTTTGAGCTACCTGAAGAGCATTGAGACTGCATACAAGAAGACCTTCCTTCCTAAAATCAGTGAAGAAGCAGAGGTTCTTACATATGGTGCAGTTGAAGCCCAGGACGTTGAGAAGGTTGTTGAGGATATTGAATGCCTCAAGTTTCAGAAGGGCCCTTGGGTGAATCAGAATGATGTCTCTTTCCATCATATGCGAATGTTGGTGGAAGACAAGCAGAGGgtaaccagcctgaccagctttcCCAGCTTTATCCCAGAAATCACAATTGGTGCTCATGAGTTAGATTCCACCTATTATGCTTTCAAATCGGCTCCCGGGAAAGAGGTACGCTGAAGGTTATAATGAAGATGTCGGGGACAAAGGTATCTGGCTGAAGTGAGGTACACGGGTGTCGCTGGAGGGAAGGACATCTAAAAGACAGATTTCTTGTGGTATTAAATCTACATGTTCTCTGGCAAAAGATATATTCTGCTCATCTGCAGCTcaagatgtctctgtacattactattaaaacatttattgtacTTGTTAaaa
>TCONS_00074234
CTGTAATGTTCCAAATATTAAAACGTATTgaacattttgtatttatttaagaatgtttattttattttattttattttattttattttattttattttattttattttacgaaGGCTTTTGTCATGTGAAACAACCGCATGTCGCACTGATGACGTACATCTCCCGCGACGCGAGATCCTTCGTCGACATTGAGGATCATTGAACTCGCTAGAAATCTTGTAGTTTCGCTATGGCGTTGCGGTTGTTTCGGCTAGTTGTGCCTTCGGGTGCAGCAGCTTGGAAACCTGTGTCGCCTATACAAACGgctAAAATCCACACAAGTGCTGTCAGAAACCTGCGTTATGGATGGTTGGCTTACGTTATGGGTGAGAGGGCAAGCTCCCGCTTCAAGGAAAACAGCAAAATTATTTCCATTGATGGCAACTTGGCGTCTGGAAAAGGAGTACTTGCACAAGAATTGGCCGAAAAGCTGGGAATGCTGTACATGCCCGAGCCAGACACACACTATGTGGACAAAATGACAAAGGAGAAAGTTCCTTTAGATCAGGCTTTTAATGGGAACTGCTCTCTGGAGAAGTTCTACTTGGAGCCCAAAGCCAGTGATGGAAACTCATACCGCCTGCAGGCTTGGATGTACCTCATGAGGCTTCTGCAGTACTCTgatgctgttgaacacctgctcaCGACAGGACAGGGAGTTATACTGGAACGATCTCCTTTTAGTGACGTTGTGTTTTTGGAGGCCATGTTCAAAGAAGGATACATCCGCAAGCAGTGCGTGAATCACTATAATGAGATTAAGGGTATCAGTATTTGTGAGTTTCTTCCCCCTCATCTTGTCATCTACGTGGACTCACCTGCTGAAGAGGTCCAGAAGAAGCTCAAAGCATCAGGAAAGCCATACCTACAGAATGTTCCTTTGAGCTACCTGAAGAGCATTGAGACTGCATACAAGAAGACCTTCCTTCCTAAAATCAGTGAAGAAGCAGAGGTTCTTACATATGGTGCAGTTGAAGCCCAGGACGTTGAGAAGGTTGTTGAGGATATTGAATGCCTCAAGTTTCAGAAGGGCCCTTGGGTGAATCAGAATGATGTCTCTTTCCATCATATGCGAATGTTGGTGGAAGACAAGCAGAGGgtaaccagcctgaccagctttcCCAGCTTTATCCCAGAAATCACAATTGGTGCTCATGAGTTAGATTCCACCTATTATGCTTTCAAATCGCTCCCGGGAAAGAGGTACGCTGAAGGTTATAATGAAGATGTCGGGGACAAAGGTATCTGGCTGAAGTGAGGTACACGGGTGTCGCTGGAGGGAAGGACATCTAAAAGACAGATTTCTTGTG

Function

symbol description
ndufa10 Predicted to be involved in mitochondrial electron transport, NADH to ubiquinone. Predicted to be located in mitochondrial matrix and respirasome. Predicted to be part of mitochondrial respiratory chain complex I. Predicted to be active in cytoplasm. Is expressed in several structures, including alar plate midbrain region; gut; immature eye; myotome; and nervous system. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 22. Orthologous to human NDUFA10 (NADH:ubiquinone oxidoreductase subunit A10).

GO:

id name namespace
GO:0006120 mitochondrial electron transport, NADH to ubiquinone biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0005747 mitochondrial respiratory chain complex I cellular_component
GO:0005759 mitochondrial matrix cellular_component
GO:0070469 respirasome cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005739 mitochondrion cellular_component

KEGG:

id description
ko00190 Oxidative phosphorylation
ko04723 Retrograde endocannabinoid signaling
ko04714 Thermogenesis
ko05208 Chemical carcinogenesis - reactive oxygen species
ko05010 Alzheimer disease
ko05012 Parkinson disease
ko05014 Amyotrophic lateral sclerosis
ko05016 Huntington disease
ko05020 Prion disease
ko05022 Pathways of neurodegeneration - multiple diseases
ko05415 Diabetic cardiomyopathy
ko04932 Non-alcoholic fatty liver disease

ZFIN:

id description
ZDB-GENE-030131-670 Predicted to be involved in mitochondrial electron transport, NADH to ubiquinone. Predicted to be located in mitochondrial matrix and respirasome. Predicted to be part of mitochondrial respiratory chain complex I. Predicted to be active in cytoplasm. Is expressed in several structures, including alar plate midbrain region; gut; immature eye; myotome; and nervous system. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 22. Orthologous to human NDUFA10 (NADH:ubiquinone oxidoreductase subunit A10).

Ensembl:

ensembl_id ENSDARG00000013333

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00074233 False 1309 mRNA 0.46 10 23740506 23747264
TCONS_00074234 True 1350 mRNA 0.44 10 23740609 23747409

Neighbor

gene id symbol gene type direction distance location
XLOC_037815 NA coding downstream 39871 23697064 ~ 23700635 (-)
XLOC_037814 NA coding downstream 45934 23691258 ~ 23694572 (-)
XLOC_037813 CR392363.2 coding downstream 352431 23383414 ~ 23388075 (-)
XLOC_037812 sh3bp4 coding downstream 357375 23369294 ~ 23383131 (-)
XLOC_037811 arl4cb coding downstream 381909 23356774 ~ 23358597 (-)
XLOC_037817 parp9 coding upstream 6866 23754275 ~ 23765480 (-)
XLOC_037818 esyt3 coding upstream 36447 23783856 ~ 23807032 (-)
XLOC_037819 wdfy2 coding upstream 66184 23813593 ~ 23824290 (-)
XLOC_037820 serpine3 coding upstream 95475 23842884 ~ 23850978 (-)
XLOC_037821 si:dkeyp-74a11.1 coding upstream 111908 23859317 ~ 23885220 (-)
XLOC_037801 NA non-coding downstream 1113745 22618456 ~ 22626761 (-)
XLOC_037770 NA non-coding downstream 1922769 21816200 ~ 21817737 (-)
XLOC_037823 NA non-coding upstream 160674 23908083 ~ 23909865 (-)
XLOC_037824 CR545476.2 non-coding upstream 164482 23911891 ~ 23912005 (-)
XLOC_037827 NA non-coding upstream 286343 24033752 ~ 24035345 (-)
XLOC_037830 NA non-coding upstream 422206 24169615 ~ 24186056 (-)
XLOC_037835 CR538727.1 non-coding upstream 587754 24335163 ~ 24335279 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000009_08425414_08428737 NDUFA10 coding CI01000009 null 8425284 ~ 8428737 (+)