G1877770



Basic Information


Item Value
gene id G1877770
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 51710349 ~ 51710689 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2148120
gaaataccttatttacataagtatttagacactttgctatgagactcaattgagctcaggtgcattctgtttccattaatcatccttgagatgtttctgcaacttgacgagagtccacctgtggtaaattcaattgattgtaaaTTATTTGGagaggcacacctgtctatataaggtctcacagtcaacagtgcacgtcagagcaaaaaccaaggcatgaggtcgaaggaattgtccgtagagcgccgagaccggattgtttaaaggcacatatCTTGGGAAGCgtaccaaagaatttctgcagcatgaaggtccccaagaacacagtggcctccatcatt

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2148120 True 341 lncRNA 0.43 1 51710349 51710689

Neighbor


gene id symbol gene type direction distance location
LOC110502952 NA coding downstream 940014 50766291 ~ 50770335 (-)
LOC110502951 LOC106610147 coding downstream 944118 50615029 ~ 50766231 (-)
dnai2b LOC106610195 coding downstream 1099918 50594746 ~ 50610431 (-)
LOC110503027 LOC106610207 coding downstream 1116949 50520914 ~ 50593400 (-)
LOC110502949 csnk1d coding downstream 1196835 50495823 ~ 50513514 (-)
LOC110502956 LOC106610551 coding upstream 91857 51802546 ~ 51813619 (-)
LOC110503030 tekt3 coding upstream 117854 51828543 ~ 51842849 (-)
LOC118943832 NA coding upstream 234749 51945438 ~ 51953168 (-)
LOC110502957 LOC106610540 coding upstream 560716 52271405 ~ 52315778 (-)
trnag-ccc-6 NA coding upstream 1056160 52766849 ~ 52766919 (-)
G1877761 NA non-coding downstream 18614 51691496 ~ 51691735 (-)
G1877706 NA non-coding downstream 100260 51609115 ~ 51610089 (-)
G1877623 NA non-coding downstream 253352 51456716 ~ 51456997 (-)
G1877622 NA non-coding downstream 256674 51450640 ~ 51453675 (-)
G1877575 NA non-coding downstream 330220 51379910 ~ 51380129 (-)
G1877938 NA non-coding upstream 157278 51867967 ~ 51868421 (-)
G1877950 NA non-coding upstream 167298 51877987 ~ 51878195 (-)
G1877977 NA non-coding upstream 198315 51909004 ~ 51909205 (-)
G1878008 NA non-coding upstream 217683 51928372 ~ 51928620 (-)
G1878100 NA non-coding upstream 288477 51999166 ~ 52026414 (-)
G1876522 NA other downstream 940032 50766030 ~ 50770317 (-)
G1876460 NA other downstream 1254640 50455321 ~ 50455709 (-)
LOC110503025 LOC106610281 other downstream 1495845 50212050 ~ 50253496 (-)
G1875984 NA other downstream 1657558 50051291 ~ 50052791 (-)
LOC110503141 LOC106610139 other downstream 1864021 49732121 ~ 49855083 (-)
G1877873 LOC106610563 other upstream 47473 51758162 ~ 51765341 (-)
G1877882 NA other upstream 81929 51792618 ~ 51792968 (-)
G1877986 NA other upstream 204258 51914947 ~ 51915249 (-)
G1878014 NA other upstream 224035 51934724 ~ 51935044 (-)
G1878101 NA other upstream 325907 52036596 ~ 52037750 (-)

Expression



Co-expression Network