XLOC_037817 (parp9)


Basic Information

Item Value
gene id XLOC_037817
gene name parp9
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 23754275 ~ 23765480 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00074235
atgaaaaaaaatgaccccaaacttttgaccggtagtgtatgtgatcttaataattttgttaaatgtatgtttctaacaagtttttcaaaaatattgttaaacataaaacatgaaACACATGAAAAGTGTTTAATTATACCACTGagtgaagaaaaaacattttacattgatattcctttaacacttttaatatttgttttcctttCAATTTGCTTCTATCACCAGGTTGACGTACTTGTAAATACCATTGCACCAGATTGTAAATTGCACCAGGGGGTGATTTCAAGAgcaattttgaagaaagctggcgACGAGATTCAAAATGAGATTTACAAAAAGAAAAGCAATACCTCATTTTACAGTTCAAAAGTTCTTTACAAGACAAAAGGATATAATCTGTATTGCAAATCTGTTTTCCATACTGTTTGTGCACATAGATCTGATTCTAAATCCAAAGAGATTCTTTTCAATGTGGTGTTGGAATCTCTGAAGAAAGCTGCTGAGGATTATGAGTCTATCTCTTTCCCAGCTATTGGCACTGGTAATCTGGACTTCAAAAAATGGGAGGTTGCCAAAATCATGATGGATGCTGTGGCAGAATTTGCCAAACAGAATAAAAGGAAGAAACTggatgtatactttgttgtttttCCAAAAGACAATGACATGATGAAGGCTtttgaaaatgagatgaaaaaGAGGAAAGGACAGGCAACGTCACCAGAAGTACAACACAGGCAAAATTACAATGTGGCAACCAAAGAAACCACAACAAATGAAATGCCATCTGTTATGTTTCAAAGTGCTACAAAGTGCAATGAATCTTTGAGAGAAGCAAAAGGGTGGGCTTGTAATATGCTACAGCTTTCTGGAAAGAGCACAATTAATAACAACCATGTGATATATCTTGGCCAAAAAGAACATGAGTTCCTGCTCACTCTCCAAGCAGTTTTTGATGTTCGCATTGAAGAGTTCTTCAGGAGTGGGAATGGTGGCATAACCATCACTGGAAGTCCCTCAGGTGTCAGCTGTGCAGCGATTGAGGTGGAGTCCATGCTTTGTAAGGCTCAGAACGATTTTGCTCGAGCTGAAGAACGTGACATTCTCTATTCCGTGGTTCGCTGGAGCTGTAAAGAAGAGCCTTGGATACAAACACCTGAAATAAGTGGGATTTTGGAGAAAGCTTTTTTGGCTGGGGAAGAAAACCATGTGTTCAAAAACCACAAAGTCAGCTTGAAGTATGAGCTTATTGTTGACAATACTGGAAAAACAAGCAGTGTGAAAAGGAAATGCCTGTTGGATCCTTTCCAGTCTCTTAACAATTCATTTTATGCAAGAAATCCTGTgaccaaaaattattttttggaaATAGAAGGAAGGAAAGCCTCCACTGCCTTCAGGCTCTCTATCATAAAGGTGGAGAAGCTAGAGAACATCGTGCTGAAACAGCTATTTGACAAGAATAGGCAGAGAATAAAATGCCAACCAAAGCGCCTCTACCAGTGTGTGTCTGCTCAATATGTTGATCTCATCTGCAGAGTTGGCTTTCAGAAGGAGTTTGCCCCTCCTGCAGAACAAAGGCATGGCAATGGAATTTACTTCAGCACTTCAGTGGAGGGAGCCCTGAAGCTGTGGAGGAATCTGGAGCATGAACAGTATGTCTACATTATTCAGGCACAGGTCCTCACCGGGAACTCTGCGATTGGTTCTCCAGATTTCATTTTGCCCCCATCCTTAAAGGGAGACCCCTTGGAGCGTTATGATAGCTTGTCTGACATGGGAGAAACATACGTCATCTTCAGCGTTCAACAAGCTCTTCCAGAATACCTGGTCATATGTGCCAAATCAAGCTCTGTTTAGATGCTCACCTTTTTGATTTGAAAtaacattttttcatatttagaaattaaaaataaaagatttttgcaATCATTAGTCACATATCACTTGGTGagttataatatacatttaatctCATTTACTCTACAGGTCAAAGGTTGGGGCTCagtataatttctttttaaaattattattattagcaaataaattacagttttaaaattatattcCATGATCAAACATGACAGTAAAGACAATTCATTTTACAGATTACAGTTTTCAGCATTGATGATAATGAGATGTTTTTGAGACACAAAATATACATATTAGTATGACTTATGAAGGATCATGTAAAGTTAGTTTTGACATTacaagaataaattacatttaagatATATCAAAATGCAAAACATTAACAATTGACAAATTTTCAATTTACAATTTAAGATTGcattattttatacaaaaaataattaaaaaataactcTTTCAAATGCATCGATTTCAGACTTCAAATTTTTTAATAGTAgtgtacaatttttattattattaagtaatttgtaaatattggtgtaaaatgaaaataatcattGATCATAACAGAATAAGGGTAAATAGTTTAGCTTATAGGTTTATGATTTAAAAGTATGCTTAAATTCATTTATCAGTTAATAGAATACAAACAGTCTGGGACCGTTTATTTTATGAGAAATCAAGATCTTCATATTCAATGTGATTTGCACAGCTGAATAATATGGAATGCtttgacataaataaaaaaatgccaaaTTCCAACCAAATTTTCTCTCATTATTGCTTTCATCTGAACAAGATTGTAATATAGATGTAgaataaattttttattacagaaatacaATAAGGCTATAATAAGACAAGATTTGTATTGAAAGaagtataaaacaatgaaagggtacaattattttaactgaaaatatattgaCATTTCAATATTGATATCACCggtgtaatatttatataaatatattttaagaatattttaataCAAATCAAATTTTCAGCaaagtaaaaatgtacaaattgttaaaaactgtaataattttCACATGTTAAGCCAGTTATACAGTATGATTTTGGGTCAGATTTTGATCCAAATTCTGTATCGtgtgaattttattatttttttaatcgggCTGAATTACAGCTTTGCCATGCATTGTCTGTGCACTAAACAAGGTAAACTAATTCTGACATTTTCTGGCAATTCAGACATTTTGGTCTGCCCTTGTGAGGGAATTGCACAGTAAAATAAGAACTTTAAATCGATTGAACAAAACTCAATGTTTGTGCATCCCACAGCACCCAAAGACATTAAAATTGTTATCCGAAGTTGCCCCCCCATAACAGCCATTTTGAGTGGTATCCCAAACCATAGTGGATGTTGTGAAGTGCACTccatcaatcccacaatgcacagcAATAATGAGTCTACAACCCATGTACGCTTAACAGCTAGAACATCCACAAAATGCACTGAGAGAGCTTCATCGCTGAAAGCCGTCCACAACTGACCACAAGGTGACATCTAAAGCGCAGTCCTATTGTTGTAAGCttagaaattacattttatttaaaacaacatttgtaTCTGTGACAGAAATTAAagtttcattactaatagacagcttgttaagtgtaaaattaaataactatcaCAGGGGGTGACCCaggaaattcaaaacacaaagAACCCGGCATCCCTTCTGGTGTACTACGTGCCCAAATTCACTcttttcattcactccttcaaaTGGACTACATTAGTGGACTAATGGAAGGAATTGTGCATGAAGATATAGGAGGTGATTTCAGATACAGCATATGACGGCACCTGCACAAAACAGAAACAGGCACACACACTTCCAGGTTCAGGGGGGTTAGATGGTGCAATATTTACAGATATTGAGCAGGATAAAAAAACGTAAATTACTAGTTTGCCAACCACCATCTAACAAAAAAGTAGAAGAAGTGGGTACGAGAATCCCCACcgccattttaaaatgcattctgCCTCTTCAAGTGATTGAGAGAAGCTTTCATATGTACACTTTAGCATGCAATGTAACTGTGATGTCACAATAAGGTAGATCCCAGGCAATCAAGGGTTTAAAAGGCATTCCATTTAAACCCATTCTGATGTTCGCCAGTAGTGGACACTTGTGTAACAAAATCAATGATGTACATCTAAGGGAACGAGACGGAGAGATGTTAGCGAGTGAAGGGCATAAAAAATTGTACTGGAATGCAGTCTGGAAATATTACCTGCTGTATGGCAATTCAGAGTGGAATAAATCATGACTGCCATATTGAAATGTTGTTCCAAACCAAAGTGCTTAAAACTGGCTACTTCGAAGGGCCCTTTTGAATgaaggatgtaaaaaaaaaactacaactgaTGGACAGTTTTTAGACCGTGATCCTTTAAGCAGGGAAATTGTTTGGTTTCACACACTCCACTCAATTCAAAAGTGACCCTCCGAAAGTTTTTGGGCATACAGATGAGCCCTTCCGAATGGAACCCAGTGCAATTTCATATGCACAGTGTGACCAGTCAACTCACTACGGACCAATCGCACTGTATTGTGTGTGCAATGTGCACATGAATAGTGAGCTTTTTTACATCGCAAGTGATCTTCCCAAAACGCTGCGAGTTGGTACCTTGTACAAATCGCAAAAAAGTTGCACAGTGTATGCCCTGTCTTAGGCAAATGTAGCTTGTTTATGTTTAAATTCAGAAACATTTTTCAGTTCAGCCTAAACACTGATCTAAACAGTGTGTCATGATAACATGTTCACATATAGGAGTTGTTTCGGAAGTAAGCTAATGCCAGAAGAAGATGAGCACATCACATGACCTTGAATTCACCAGACAAGAAGCTTGAACAACCAGAAATATGTTATTGTCAAAGGCCATGAGACAAAGTATCTTAAAACACAGAGTCATATTAAATCATATTTCCCTAAACAATATTATTGCTGTATTCTGACCCTTTATGAATCAGTAGATTTTGGACAAAATTCTCTAAACAACACACGTTCATTTGTAATCCATACTTGGACCACGCTTATATATATTCATCTTGAATTGTAATTTAAGAATGTTTGCACTGAACAACAtgattaaagtaaaatattaaagatatagataattatatatatatatatatatatatatatatatatatatatatatatatatatatatatataatttattattattattttttgcagtggATCTAAAAAATAGGTCCAGGCATTCACAAATATATACGTGTCACAGTTAACTTCActgtaagaataataaaaaaaaaacattgacatcaCTTCCCGAAAAGAATAAATGAACCATTTAGAGAGAACAATTGctataaagcaaaaaaaacaagTGTTTGTAAGACACGTCTGTTTCTCATGCCTCAAAGTGGACCATTACTGAACCAGCACACGCTGATTTGTGGTCAGAAATGAGCACATGGTAACCCAACATCCGTATATACTGTACACTCTTCTGATGAGGATGGATCATCCAGACACTCTCACACAGTCATTCGGACAGCTCATTCTGCCTCGGAGATCTCCATGCCGTCCACCAGCAGTGTGTGAATGATGCCATCTCGTCTCTTGCCGCTGCTCACAGCTTTGATGCAGCAGTCATGGTCACCCAGAGTGAAGTGTGTCTCTGTACCGTCCTCCACGAACTCACCCTGAGGGAGAACAACATGACAGGTGAATGCTTTTCTCTTGAAGGGATGTTGTTATGGTAATCAGGCATGCTGTAAAACCAGTGTGCCAGTATGTCCTTTGAAAGTGACAATCATCAAACATTgttcacatttttacattttcattgcaCCATCTGTCCTGTCAGGGCACTTAATGCATTAGGTAGATTTAGATAGAGTAtatcaaaaaaacattttctgatTTGATTTCATTAAGTCACACTAATTTGTAGGacggcatggtggcgcagtgggtagcactgtcgcctcacagggtcactagtttgagcctcggctgggtcagttggcatttctgtgtggcgtttgcttGTTTCCTGTGTTCGCataagtttcctccgggtgctccgttttcccccaaagtccatagacatgctctatagatgaattgggtaggctcaattgtctgtagtgtacgtgtgagagtgtatggatgtttcttagtgatggaatgcagctggaagagcatcagctttgtaaaacatgtgctggataagttggtggttcattcctctgtggcaacccctgactaataaagggacta
>TCONS_00074236
ACACAAAGCTTCAAGCAGAAACCCACTTGGTAACTCATCGAGGCGTCTTTCTTAAAGAAGTGTCAAAGCACAGGCCAAATACATCTGTGACCTGAGGAAGCTACAAACCATGAGTGACAAAGAACAGGGTCTGCTACCTCTGGCTGCAGAGCAGGCTGCCATTCTGGCAAAGTGTAGAAATGCCTTTTGCCATGCAGTTATTGAAAAATTTAATTGCATGGCTATTCTCCACAATATAAAAGAGTCTGAAGCCTTAAGTAACACAAGTGGTGTTTTTTGTGCTGAGAAAAGATATTTCACAAGGCTGTCCAGTGGAGTGGAGATATCAGTCTGGAAAGATGATCTTACACAGCATAAGGTCGAAGCTGTGGTCAATGCAGCCAATGAGAAACTACAGCATGGAGGAGGTCTTGCACAAGCCCTGAGTATGGCTGGAGGACCACAGATCCAGCGATGGAGTGATGATATTATAAAACGATATGGATACGTGAAAACTGGTGAGGCTGTTCTTACTCCTGCTGGAAATCTCCCATTTAAATATATCATACATGCTGTGGGTCCCAAAGTGCCTCAAAATCCAACCCAGAAAGAGATTGGAGATGCTACACCGTTGTTATATAATGCTATTACTAGTATCCTACAAACCGTTCTTCGTGAAAACATAACTTCTGTTGCAATTCCTGCTCTGAGTTCTGGACTTTTCAATTTTCCAAGAGATCGCTGTGCAGACATTATTGTGAAGGCTATAAAGACATTCCATGATCATGGAGGGTTCCAGGGCAGGAATTTAGAAATCCATCTCGTCAATAACGATGAACCCTCAGTTCAAGAAATGGAGAGAGCCACTAGGGCAATTTTTGATCCACCAAGCACCTCTAGATTGTACAGTGGGGCTGTGAAAGACAGCAGCCAGAGCATGACCTCCTCTACAagccaaagcttgcagtttgagAACATAATCCTGTACCTTAAAAGAGGGGCTATTGAAGATGAAATGGTTGACGTACTTGTAAATACCATTGCACCAGATTGTAAATTGCACCAGGGGGTGATTTCAAGAgcaattttgaagaaagctggcgACGAGATTCAAAATGAGATTTACAAAAAGAAAAGCAATACCTCATTTTACAGTTCAAAAGTTCTTTACAAGACAAAAGGATATAATCTGTATTGCAAATCTGTTTTCCATACTGTTTGTGCACATAGATCTGATTCTAAATCCAAAGAGATTCTTTTCAATGTGGTGTTGGAATCTCTGAAGAAAGCTGCTGAGGATTATGAGTCTATCTCTTTCCCAGCTATTGGCACTGGTAATCTGGACTTCAAAAAATGGGAGGTTGCCAAAATCATGATGGATGCTGTGGCAGAATTTGCCAAACAGAATAAAAGGAAGAAACTggatgtatactttgttgtttttCCAAAAGACAATGACATGATGAAGGCTtttgaaaatgagatgaaaaaGAGGAAA

Function

symbol description
parp9 Predicted to enable pentosyltransferase activity; transcription corepressor activity; and ubiquitin-like protein ligase binding activity. Predicted to be involved in negative regulation of gene expression; positive regulation of interferon-gamma-mediated signaling pathway; and protein ADP-ribosylation. Predicted to be active in cytoplasm and nucleus. Orthologous to human PARP9 (poly(ADP-ribose) polymerase family member 9).

GO:

id name namespace
GO:0060335 positive regulation of interferon-gamma-mediated signaling pathway biological_process
GO:0010629 negative regulation of gene expression biological_process
GO:0070212 protein poly-ADP-ribosylation biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0044389 ubiquitin-like protein ligase binding molecular_function
GO:0016740 transferase activity molecular_function
GO:1990404 protein ADP-ribosylase activity molecular_function
GO:0016757 transferase activity, transferring glycosyl groups molecular_function
GO:0003950 NAD+ ADP-ribosyltransferase activity molecular_function
GO:0003714 transcription corepressor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-081104-179 Predicted to enable pentosyltransferase activity; transcription corepressor activity; and ubiquitin-like protein ligase binding activity. Predicted to be involved in negative regulation of gene expression; positive regulation of interferon-gamma-mediated signaling pathway; and protein ADP-ribosylation. Predicted to be active in cytoplasm and nucleus. Orthologous to human PARP9 (poly(ADP-ribose) polymerase family member 9).

Ensembl:

ensembl_id ENSDARG00000006848

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00074235 False 6165 mRNA 0.36 7 23754275 23761087
TCONS_00074236 True 1477 mRNA 0.41 6 23760216 23765480

Neighbor

gene id symbol gene type direction distance location
XLOC_037816 ndufa10 coding downstream 6866 23740506 ~ 23747409 (-)
XLOC_037815 NA coding downstream 53640 23697064 ~ 23700635 (-)
XLOC_037814 NA coding downstream 59703 23691258 ~ 23694572 (-)
XLOC_037813 CR392363.2 coding downstream 366200 23383414 ~ 23388075 (-)
XLOC_037812 sh3bp4 coding downstream 371144 23369294 ~ 23383131 (-)
XLOC_037818 esyt3 coding upstream 18376 23783856 ~ 23807032 (-)
XLOC_037819 wdfy2 coding upstream 48113 23813593 ~ 23824290 (-)
XLOC_037820 serpine3 coding upstream 77404 23842884 ~ 23850978 (-)
XLOC_037821 si:dkeyp-74a11.1 coding upstream 93837 23859317 ~ 23885220 (-)
XLOC_037822 asb18 coding upstream 119961 23885441 ~ 23894392 (-)
XLOC_037801 NA non-coding downstream 1127514 22618456 ~ 22626761 (-)
XLOC_037770 NA non-coding downstream 1936538 21816200 ~ 21817737 (-)
XLOC_037823 NA non-coding upstream 142603 23908083 ~ 23909865 (-)
XLOC_037824 CR545476.2 non-coding upstream 146411 23911891 ~ 23912005 (-)
XLOC_037827 NA non-coding upstream 268272 24033752 ~ 24035345 (-)
XLOC_037830 NA non-coding upstream 404135 24169615 ~ 24186056 (-)
XLOC_037835 CR538727.1 non-coding upstream 569683 24335163 ~ 24335279 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000009_08412100_08415817 NA coding CI01000009 null 8412100 ~ 8415916 (+)