G1877938



Basic Information


Item Value
gene id G1877938
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 51867967 ~ 51868421 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2148320
agagaacagtgtggaggacgagagagaataGTGTGGAGGACGAGACAGAATAGCgtggaggacgagagagaacagtgtggaggacgagagagaacagtgtggaggacgagagagaatagtgtggagaaagagagagaatagtgtGGAGAACGAGACAGAATAGCgtggaggacgagagagaacagtgtggaggacgagagagaacagtgaggaggacgagagagaacagtgtggaggacgagagagaatagtgtggaggacgagacagaatagtgtggaggacgagagagaacagtgtggaggacgagagagaacagtgtggaggacgagagagaacagtgtggaggacgagagagaataGTGTGGAGGATGAGACAGAATAGtgtggaggacgagagagaacAGTGTGGAGGACGAGAGAAAATAGTGTGATGGACGAGAGAGAATAGTGTAGA

Function


NR:

description
PREDICTED: octapeptide-repeat protein T2-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2148320 True 455 lncRNA 0.51 1 51867967 51868421

Neighbor


gene id symbol gene type direction distance location
LOC110503030 tekt3 coding downstream 25118 51828543 ~ 51842849 (-)
LOC110502956 LOC106610551 coding downstream 54348 51802546 ~ 51813619 (-)
LOC110502952 NA coding downstream 1097632 50766291 ~ 50770335 (-)
LOC110502951 LOC106610147 coding downstream 1101736 50615029 ~ 50766231 (-)
dnai2b LOC106610195 coding downstream 1257536 50594746 ~ 50610431 (-)
LOC118943832 NA coding upstream 77017 51945438 ~ 51953168 (-)
LOC110502957 LOC106610540 coding upstream 402984 52271405 ~ 52315778 (-)
trnag-ccc-6 NA coding upstream 898428 52766849 ~ 52766919 (-)
LOC110503032 LOC106610511 coding upstream 906730 52774656 ~ 52816006 (-)
LOC110503033 LOC106589632 coding upstream 957072 52825493 ~ 52860654 (-)
G1877770 NA non-coding downstream 157278 51710349 ~ 51710689 (-)
G1877761 NA non-coding downstream 176232 51691496 ~ 51691735 (-)
G1877706 NA non-coding downstream 257878 51609115 ~ 51610089 (-)
G1877623 NA non-coding downstream 410970 51456716 ~ 51456997 (-)
G1877622 NA non-coding downstream 414292 51450640 ~ 51453675 (-)
G1877950 NA non-coding upstream 9566 51877987 ~ 51878195 (-)
G1877977 NA non-coding upstream 40583 51909004 ~ 51909205 (-)
G1878008 NA non-coding upstream 59951 51928372 ~ 51928620 (-)
G1878100 NA non-coding upstream 130745 51999166 ~ 52026414 (-)
G1878155 NA non-coding upstream 190000 52058421 ~ 52059404 (-)
G1877882 NA other downstream 74999 51792618 ~ 51792968 (-)
G1877873 LOC106610563 other downstream 102626 51758162 ~ 51765341 (-)
G1876522 NA other downstream 1097650 50766030 ~ 50770317 (-)
G1876460 NA other downstream 1412258 50455321 ~ 50455709 (-)
LOC110503025 LOC106610281 other downstream 1653463 50212050 ~ 50253496 (-)
G1877986 NA other upstream 46526 51914947 ~ 51915249 (-)
G1878014 NA other upstream 66303 51934724 ~ 51935044 (-)
G1878101 NA other upstream 168175 52036596 ~ 52037750 (-)
G1878324 NA other upstream 339007 52207428 ~ 52207627 (-)

Expression



Co-expression Network