Gene
RNA
| Item | Value |
|---|---|
| gene id | G1878155 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 52058421 ~ 52059404 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2148557 | True | 327 | lncRNA | 0.44 | 2 | 52058421 | 52059404 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943832 | NA | coding | downstream | 105253 | 51945438 ~ 51953168 (-) |
| LOC110503030 | tekt3 | coding | downstream | 215572 | 51828543 ~ 51842849 (-) |
| LOC110502956 | LOC106610551 | coding | downstream | 244802 | 51802546 ~ 51813619 (-) |
| LOC110502952 | NA | coding | downstream | 1288086 | 50766291 ~ 50770335 (-) |
| LOC110502951 | LOC106610147 | coding | downstream | 1292190 | 50615029 ~ 50766231 (-) |
| LOC110502957 | LOC106610540 | coding | upstream | 212001 | 52271405 ~ 52315778 (-) |
| trnag-ccc-6 | NA | coding | upstream | 707445 | 52766849 ~ 52766919 (-) |
| LOC110503032 | LOC106610511 | coding | upstream | 715747 | 52774656 ~ 52816006 (-) |
| LOC110503033 | LOC106589632 | coding | upstream | 766089 | 52825493 ~ 52860654 (-) |
| LOC110502960 | lsm12 | coding | upstream | 932060 | 52991464 ~ 53012988 (-) |
| G1878100 | NA | non-coding | downstream | 32007 | 51999166 ~ 52026414 (-) |
| G1878008 | NA | non-coding | downstream | 129801 | 51928372 ~ 51928620 (-) |
| G1877977 | NA | non-coding | downstream | 149216 | 51909004 ~ 51909205 (-) |
| G1877950 | NA | non-coding | downstream | 180226 | 51877987 ~ 51878195 (-) |
| G1877938 | NA | non-coding | downstream | 190000 | 51867967 ~ 51868421 (-) |
| G1878195 | NA | non-coding | upstream | 43375 | 52102779 ~ 52102980 (-) |
| G1878215 | NA | non-coding | upstream | 60925 | 52120329 ~ 52120644 (-) |
| G1878236 | NA | non-coding | upstream | 75997 | 52135401 ~ 52135674 (-) |
| G1878252 | NA | non-coding | upstream | 86028 | 52145432 ~ 52145994 (-) |
| G1878254 | NA | non-coding | upstream | 90840 | 52150244 ~ 52150449 (-) |
| G1878101 | NA | other | downstream | 20671 | 52036596 ~ 52037750 (-) |
| G1878014 | NA | other | downstream | 123377 | 51934724 ~ 51935044 (-) |
| G1877986 | NA | other | downstream | 143172 | 51914947 ~ 51915249 (-) |
| G1877882 | NA | other | downstream | 265453 | 51792618 ~ 51792968 (-) |
| G1877873 | LOC106610563 | other | downstream | 293080 | 51758162 ~ 51765341 (-) |
| G1878324 | NA | other | upstream | 148024 | 52207428 ~ 52207627 (-) |
| G1878770 | NA | other | upstream | 583684 | 52643088 ~ 52643509 (-) |
| G1879406 | NA | other | upstream | 1103838 | 53163242 ~ 53164351 (-) |
| LOC110503036 | LOC106610742 | other | upstream | 2008383 | 54039018 ~ 54073953 (-) |
