G1878314


Basic Information

Item Value
gene id G1878314
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 52201326 ~ 52201891 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2148720
acgcatatgaagcgagggccaaccaacgagagcgtccaggtcgcaatggtgggtagtgtatggggctttggtgacaaaacggagggcactgtgatagactgcatccagtttgttgagttgagtgttggaggctattttatagatgacatcaccgaagtcgaggatcggtgggATGGTCAATtttacagcatgagtgaaggatgctttgttgcgatataggaagccaattctagatttcattttggattggagatgcttaatgtgagtctggaaggagagtttacagtctaaccagacacctaggtatttgtagttgtccacgtaatCTAAGTCatagccatccagagtagtgatgctggacaggcgagcagtgatcggttgaatagcatgcatttagttttccctgcgtttaagagcagccaaggaaggagagttgtatggcattgaagctcgtctggaggttagttaacagaggtgccagaagtatacagaatggtgtcgtctgcatagaggtgtaccagagaatcaccagcagcaagagcaacatcattgatgtatacagagaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2148720 True 566 lncRNA 0.46 1 52201326 52201891

Neighbor

gene id symbol gene type direction distance location
LOC110503031 LOC106583559 coding upstream 225215 51956172 ~ 52016294 (+)
LOC110502954 LOC106610563 coding upstream 440373 51725830 ~ 51760953 (+)
LOC110503029 LOC106610476 coding upstream 491921 51312874 ~ 51709405 (+)
LOC110502948 LOC106610249 coding upstream 1713565 50457957 ~ 50487761 (+)
LOC118943895 NA coding upstream 1933763 50265894 ~ 50267563 (+)
LOC110502958 LOC106610530 coding downstream 323683 52525574 ~ 52587888 (+)
LOC110502959 LOC106610521 coding downstream 565199 52767090 ~ 52773492 (+)
LOC118943904 NA coding downstream 1196293 53398184 ~ 53400297 (+)
LOC110502965 dll1 coding downstream 1449420 53651311 ~ 53657432 (+)
LOC110502967 psmb1 coding downstream 1549475 53751366 ~ 53753611 (+)
G1878311 NA non-coding upstream 298 52200812 ~ 52201028 (+)
G1878262 NA non-coding upstream 44597 52156256 ~ 52156729 (+)
G1878258 NA non-coding upstream 47857 52153270 ~ 52153469 (+)
G1878246 NA non-coding upstream 59966 52141158 ~ 52141360 (+)
G1878240 NA non-coding upstream 64080 52136941 ~ 52137246 (+)
G1878319 NA non-coding downstream 1450 52203341 ~ 52203582 (+)
G1878325 NA non-coding downstream 6983 52208874 ~ 52209103 (+)
G1878329 NA non-coding downstream 9076 52210967 ~ 52211184 (+)
G1878344 NA non-coding downstream 21166 52223057 ~ 52223278 (+)
G1878349 NA non-coding downstream 26491 52228382 ~ 52228602 (+)
G1877363 NA other upstream 741981 51458707 ~ 51459345 (+)
G1876374 Rpl38 other upstream 1431063 50766099 ~ 50770263 (+)
G1875816 NA other upstream 1956802 50243560 ~ 50244524 (+)
G1875689 LOC100136012 other upstream 2151290 50049186 ~ 50050036 (+)
G1878346 LOC100136012 other downstream 23929 52225820 ~ 52226189 (+)
G1878893 NA other downstream 623597 52825488 ~ 52836634 (+)
G1878894 LOC106610502 other downstream 655977 52857868 ~ 52860635 (+)
G1879582 NA other downstream 1175919 53377810 ~ 53378186 (+)

Expression


Co-expression Network