G1878323



Basic Information


Item Value
gene id G1878323
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 52204564 ~ 52205847 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2148729
acagacggagaaaccgaaggagaaacagacggagaaacagagggagaaacagaaggagaaacagaaggagaaacagaaggagaaacagagagagaaaccgacgGAGAAACCGACGGAGAAACCGACGGAGAAACcgacggagaaacagacggagaaacagagggagaaacagagggagaaacagacggagaaaccgacggagaaacagacggagaaacagacggagaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2148729 True 228 lncRNA 0.50 2 52204564 52205847

Neighbor


gene id symbol gene type direction distance location
LOC118943832 NA coding downstream 251396 51945438 ~ 51953168 (-)
LOC110503030 tekt3 coding downstream 361715 51828543 ~ 51842849 (-)
LOC110502956 LOC106610551 coding downstream 390945 51802546 ~ 51813619 (-)
LOC110502952 NA coding downstream 1434229 50766291 ~ 50770335 (-)
LOC110502951 LOC106610147 coding downstream 1438333 50615029 ~ 50766231 (-)
LOC110502957 LOC106610540 coding upstream 65558 52271405 ~ 52315778 (-)
trnag-ccc-6 NA coding upstream 561002 52766849 ~ 52766919 (-)
LOC110503032 LOC106610511 coding upstream 569304 52774656 ~ 52816006 (-)
LOC110503033 LOC106589632 coding upstream 619646 52825493 ~ 52860654 (-)
LOC110502960 lsm12 coding upstream 785617 52991464 ~ 53012988 (-)
G1878302 NA non-coding downstream 10781 52193566 ~ 52193783 (-)
G1878259 NA non-coding downstream 50799 52153541 ~ 52153765 (-)
G1878254 NA non-coding downstream 54115 52150244 ~ 52150449 (-)
G1878252 NA non-coding downstream 58570 52145432 ~ 52145994 (-)
G1878236 NA non-coding downstream 68890 52135401 ~ 52135674 (-)
G1878326 NA non-coding upstream 3391 52209238 ~ 52209597 (-)
G1878340 NA non-coding upstream 11539 52217386 ~ 52217710 (-)
G1878539 NA non-coding upstream 30757 52236604 ~ 52237120 (-)
G1878540 NA non-coding upstream 32480 52238327 ~ 52238655 (-)
G1878541 NA non-coding upstream 34307 52240154 ~ 52240549 (-)
G1878101 NA other downstream 166814 52036596 ~ 52037750 (-)
G1878014 NA other downstream 269520 51934724 ~ 51935044 (-)
G1877986 NA other downstream 289315 51914947 ~ 51915249 (-)
G1877882 NA other downstream 411596 51792618 ~ 51792968 (-)
G1877873 LOC106610563 other downstream 439223 51758162 ~ 51765341 (-)
G1878324 NA other upstream 1581 52207428 ~ 52207627 (-)
G1878770 NA other upstream 437241 52643088 ~ 52643509 (-)
G1879406 NA other upstream 957395 53163242 ~ 53164351 (-)
LOC110503036 LOC106610742 other upstream 1861940 54039018 ~ 54073953 (-)

Expression



Co-expression Network