Gene
RNA
| Item | Value |
|---|---|
| gene id | G1878326 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 52209238 ~ 52209597 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2148732 | True | 360 | lncRNA | 0.47 | 1 | 52209238 | 52209597 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943832 | NA | coding | downstream | 256070 | 51945438 ~ 51953168 (-) |
| LOC110503030 | tekt3 | coding | downstream | 366389 | 51828543 ~ 51842849 (-) |
| LOC110502956 | LOC106610551 | coding | downstream | 395619 | 51802546 ~ 51813619 (-) |
| LOC110502952 | NA | coding | downstream | 1438903 | 50766291 ~ 50770335 (-) |
| LOC110502951 | LOC106610147 | coding | downstream | 1443007 | 50615029 ~ 50766231 (-) |
| LOC110502957 | LOC106610540 | coding | upstream | 61808 | 52271405 ~ 52315778 (-) |
| trnag-ccc-6 | NA | coding | upstream | 557252 | 52766849 ~ 52766919 (-) |
| LOC110503032 | LOC106610511 | coding | upstream | 565554 | 52774656 ~ 52816006 (-) |
| LOC110503033 | LOC106589632 | coding | upstream | 615896 | 52825493 ~ 52860654 (-) |
| LOC110502960 | lsm12 | coding | upstream | 781867 | 52991464 ~ 53012988 (-) |
| G1878323 | NA | non-coding | downstream | 3391 | 52204564 ~ 52205847 (-) |
| G1878302 | NA | non-coding | downstream | 15455 | 52193566 ~ 52193783 (-) |
| G1878259 | NA | non-coding | downstream | 55473 | 52153541 ~ 52153765 (-) |
| G1878254 | NA | non-coding | downstream | 58789 | 52150244 ~ 52150449 (-) |
| G1878252 | NA | non-coding | downstream | 63244 | 52145432 ~ 52145994 (-) |
| G1878340 | NA | non-coding | upstream | 7789 | 52217386 ~ 52217710 (-) |
| G1878539 | NA | non-coding | upstream | 27007 | 52236604 ~ 52237120 (-) |
| G1878540 | NA | non-coding | upstream | 28730 | 52238327 ~ 52238655 (-) |
| G1878541 | NA | non-coding | upstream | 30557 | 52240154 ~ 52240549 (-) |
| G1878546 | NA | non-coding | upstream | 36005 | 52245602 ~ 52250407 (-) |
| G1878324 | NA | other | downstream | 1611 | 52207428 ~ 52207627 (-) |
| G1878101 | NA | other | downstream | 171488 | 52036596 ~ 52037750 (-) |
| G1878014 | NA | other | downstream | 274194 | 51934724 ~ 51935044 (-) |
| G1877986 | NA | other | downstream | 293989 | 51914947 ~ 51915249 (-) |
| G1877882 | NA | other | downstream | 416270 | 51792618 ~ 51792968 (-) |
| G1878770 | NA | other | upstream | 433491 | 52643088 ~ 52643509 (-) |
| G1879406 | NA | other | upstream | 953645 | 53163242 ~ 53164351 (-) |
| LOC110503036 | LOC106610742 | other | upstream | 1858190 | 54039018 ~ 54073953 (-) |
| G1880780 | NA | other | upstream | 2035185 | 54244782 ~ 54246686 (-) |
