XLOC_037823


Basic Information

Item Value
gene id XLOC_037823
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 23908083 ~ 23909865 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075350
ATGACCTGGGACAGGGTGAAGAAGAACAAAACGCCTTCTCCACAAACATCTGCATTTGATCAAAATGCTGGAACTAAATAAGCGCACCAGGACTTGGAGCCAAACAAAAAGCAGCTGCAGTTTGTTTGACTCTCTTAAAAGGATTGTTTTTGAACCTCATCCACCACAGAGGAGAAAATGCTGTCTATGGGACTCTGTAGTGTGTTTTGTATTTGGACACCACCTTCATGTGTGGTACACTGGTGTCCAAGTTGGTCTGGCTGCTTCTAGTATGTAGTTCACATACAGAAACATAATGAGAAAGCAAAGTTTTCTACCCCTGAGTTTTTCTTGACCAAACATCATGAGAAATACACAATAAAATCAGGTAAAATTGTGGAATTCGGTGCAAATTAAATGAGTCACTCTTTACACTGGGTGAGGTTACTCACAAACCTCCCCTCCTCTTTTGAACCATCAGCAACAATTAACTTTGAAAACCTAAAAGATTTTGTAATTATATAGTTTTACACGATAGTCAGAACAAACAGCTACTTCAGAATATTTAGCTATAAAACACTATTTCTCTGTCTCCTACAAGCACACTCAGTTTTAATGCTTCTTAGCTTGGAAAAAAAGCCTATGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075350 True 625 lncRNA 0.38 2 23908083 23909865

Neighbor

gene id symbol gene type direction distance location
XLOC_037822 asb18 coding downstream 13691 23885441 ~ 23894392 (-)
XLOC_037821 si:dkeyp-74a11.1 coding downstream 22863 23859317 ~ 23885220 (-)
XLOC_037820 serpine3 coding downstream 57105 23842884 ~ 23850978 (-)
XLOC_037819 wdfy2 coding downstream 83793 23813593 ~ 23824290 (-)
XLOC_037818 esyt3 coding downstream 101051 23783856 ~ 23807032 (-)
XLOC_037824 CR545476.2 coding upstream 2026 23911891 ~ 23912005 (-)
XLOC_037825 col6a3 coding upstream 4452 23914317 ~ 23994225 (-)
XLOC_037826 rpe coding upstream 115579 24025444 ~ 24031461 (-)
XLOC_037827 NA coding upstream 123887 24033752 ~ 24035345 (-)
XLOC_037828 ackr3a coding upstream 133915 24043780 ~ 24050257 (-)
XLOC_037815 NA non-coding downstream 207448 23697064 ~ 23700635 (-)
XLOC_037814 NA non-coding downstream 213511 23691258 ~ 23694572 (-)
XLOC_037813 CR392363.2 non-coding downstream 520008 23383414 ~ 23388075 (-)
XLOC_037801 NA non-coding downstream 1281322 22618456 ~ 22626761 (-)
XLOC_037770 NA non-coding downstream 2090346 21816200 ~ 21817737 (-)
XLOC_037830 NA non-coding upstream 259750 24169615 ~ 24186056 (-)
XLOC_037835 CR538727.1 non-coding upstream 425298 24335163 ~ 24335279 (-)
XLOC_037836 BX571803.3 non-coding upstream 481022 24390887 ~ 24394382 (-)

Expression


Co-expression Network