Gene
RNA
| Item | Value |
|---|---|
| gene id | G1878546 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 52245602 ~ 52250407 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2148974 | True | 461 | lncRNA | 0.44 | 2 | 52245602 | 52250407 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943832 | NA | coding | downstream | 292434 | 51945438 ~ 51953168 (-) |
| LOC110503030 | tekt3 | coding | downstream | 402753 | 51828543 ~ 51842849 (-) |
| LOC110502956 | LOC106610551 | coding | downstream | 431983 | 51802546 ~ 51813619 (-) |
| LOC110502952 | NA | coding | downstream | 1475267 | 50766291 ~ 50770335 (-) |
| LOC110502951 | LOC106610147 | coding | downstream | 1479371 | 50615029 ~ 50766231 (-) |
| LOC110502957 | LOC106610540 | coding | upstream | 20998 | 52271405 ~ 52315778 (-) |
| trnag-ccc-6 | NA | coding | upstream | 516442 | 52766849 ~ 52766919 (-) |
| LOC110503032 | LOC106610511 | coding | upstream | 524744 | 52774656 ~ 52816006 (-) |
| LOC110503033 | LOC106589632 | coding | upstream | 575086 | 52825493 ~ 52860654 (-) |
| LOC110502960 | lsm12 | coding | upstream | 741057 | 52991464 ~ 53012988 (-) |
| G1878541 | NA | non-coding | downstream | 5053 | 52240154 ~ 52240549 (-) |
| G1878540 | NA | non-coding | downstream | 6947 | 52238327 ~ 52238655 (-) |
| G1878539 | NA | non-coding | downstream | 8482 | 52236604 ~ 52237120 (-) |
| G1878340 | NA | non-coding | downstream | 27892 | 52217386 ~ 52217710 (-) |
| G1878326 | NA | non-coding | downstream | 36005 | 52209238 ~ 52209597 (-) |
| G1878552 | NA | non-coding | upstream | 7554 | 52257961 ~ 52258840 (-) |
| G1878554 | NA | non-coding | upstream | 10034 | 52260441 ~ 52261201 (-) |
| G1878529 | NA | non-coding | upstream | 40376 | 52290783 ~ 52297189 (-) |
| G1878584 | NA | non-coding | upstream | 98120 | 52348527 ~ 52348775 (-) |
| G1878589 | NA | non-coding | upstream | 106931 | 52357338 ~ 52357647 (-) |
| G1878324 | NA | other | downstream | 37975 | 52207428 ~ 52207627 (-) |
| G1878101 | NA | other | downstream | 207852 | 52036596 ~ 52037750 (-) |
| G1878014 | NA | other | downstream | 310558 | 51934724 ~ 51935044 (-) |
| G1877986 | NA | other | downstream | 330353 | 51914947 ~ 51915249 (-) |
| G1877882 | NA | other | downstream | 452634 | 51792618 ~ 51792968 (-) |
| G1878770 | NA | other | upstream | 392681 | 52643088 ~ 52643509 (-) |
| G1879406 | NA | other | upstream | 912835 | 53163242 ~ 53164351 (-) |
| LOC110503036 | LOC106610742 | other | upstream | 1817380 | 54039018 ~ 54073953 (-) |
| G1880780 | NA | other | upstream | 1994375 | 54244782 ~ 54246686 (-) |
