XLOC_037827


Basic Information

Item Value
gene id XLOC_037827
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 24033752 ~ 24035345 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075351
tttttttttttggatgtggtgaacatttgtatatattatttttgttgagGTGGATATTAAAAGTTTTGAATTGCAACCACTGATTTCAATAAGAAATCGAGGAGTATATTGTGTAAGAAATATGAAACTATGGAACATACTTTGTAGTTGTTTCAGAAATTTAATTTTGTTGCGTTACATTGGTATATTTGCATATGAATGTATTAATGTTTTACTACTAAACAGATCAATCTGTTGTTTGCTAACACATCTGTCATACTTTCTTTCACATTAGTTGGTCATTTCCTACAGAAACACTGATTCTTTTGTTTGGGCTGCTATGTGTTATAGCTCCATTTGCACCATAAACAAACAGGTGACTCCAGACTCCCTGGAGGCGTCATTCATCACTGCGGCATAACATGACAGGAATGTGAGACTggacaaacaaaattattttagagTTCAGCAGAAGACAAATGAGTGAGATTTCTACTGGACCCCTGCAGAACTGGTGCTGTCCTCTAATATGAGGAATTGGAGGTATGCAGCTGAGACAGTGCTTCTCACGTCAGAGACATCAGGAATGAAGGAGTAGAAGCCAACACTATTCCCAAAAGCAACGCACACCATCATTCCCCACAGATGCACAGTGGAAACCCTTGCTACAAGATTTCAGATTCAGCCCTTgccaacaaaacaaacattatgtGCTATAATTATTGTATTTCCAAGAGAATGTCAAATGAGCAGCAATCTAAATGGCCCTAACTTTACTTTTGGCTTTGAACAATTTAgagattttattgttttatgctgTAAATTACCATTGACATATCTTCAAACTTTACCCTTAAAATGTTGTTCTTTTGTATAAAAGTACAAATatatggcatgtttttttttacatgtttgctTTTAGATAACACTATTTCAGCATTTTCAGAAGAGTTCAAATAATCAATATTTGTTAAAAGATTTGTTATTCTTACCAATTTTCTTTtcatgaaaaaagaaaaacagtaacAATACAGTACTTTATTTGGAATAATTTAGATATTGTCTCAgacttataataaaacaaaaattttactGAAAACCATATTAATAAATCCAGAAAATTCA
>TCONS_00075352
atatatatatatatatatatttttttttttggatgtggtgaacatttgtatatattatttttgttgagGTGGATATTAAAAGTTTTGAATTGCAACCACTGATTTCAATAAGAAATCGAGGAGTATATTGTGTAAGAAATATGAAACTATGGAACATACTTTGTAGTTGTTTCAGAAATTTAATTTTGTTGCGTTACATTGGTATATTTGCATATGAATGTATTAATGTTTTACTACTAAACAGATCAATCTGTTGTTTGCTAACACATCTGTCATACTTTCTTTCACATTAGTTGGTCATTTCCTACAGAAACACTGATTCTTTTGTTTGGGCTGCTATGTGTTATAGCTCCATTTGCACCATAAACAAACAGGTGACTCCAGACTCCCTGGAGGCGTCATTCATCACTGCGGCATAACATGACAGGTAAACCCACCATGAGCAACATGATCCAAACCACAGTACTAAGCAAACAGAAAGTCTGCTTAGATCTACAACCTACATCTGCAGATCTGACTGCAAAAGAAGATTGTCAGAAGCTTTTAATGCTTTAAAGGCAAAGTCACTattatggcaaagattaaatgaGATGATGCACTGGCACcaaatacatttgattttggTTAGATATTTATATCATCAAGAACCACATAAGGAAATGAAAATGTTATGTTACACTGCATACCAAAGAGCAGAAATAAATGTGCTTGGCCTCTTTCTCATCTAAAGTTTTGGTTTGTTGTGTTAATACCACAGGAATGTGAGACTggacaaacaaaattattttagagTTCAGCAGAAGACAAATGAGTGAGATTTCTACTGGACCCCTGCAGAACTGGTGCTGTCCTCTAATATGAGGAATTGGAGGTATGCAGCTGAGACAGTGCTTCTCACGTCAGAGACATCAGGAATGAAGGAGTAGAAGCCAACACTATTCCCAAAAGCAACGCACACCATCATTCCCCACAGATGCACAGTGGAAACCCTTGCTACAAGATTTCAGATTCAGCCCTTgccaacaaaacaaacattatgtGCTATAATTATTGTATTTCCAAGAGAATGTCAAATGAGCAGCAATCTAAATGGCCCTAACTTTACTTTTGGCTTTGAACAATTTAgagattttattgttttatgctgTAAATTACCATTGACATATCTTCAAACTTTACCCTTAAAATGTTGTTCTTTTGTATAAAAGTACAAATatatggcatgtttttttttacatgtttgctTTTAGATAACACTATTTCAGCATTTTCAGAAGAGTTCAAATAATCAATATTTGTTAAAAGATTTGTTATTCTTACCAATTTTCTTTtcatgaaaaaagaaaaacagtaacAATACAGTACTTTATTTGGAATAATTTAGATATTGTCTCAgacttataataaaacaaaaattttactGAAAACCATATTAATAAATCCAGAAAATTCA

Function

GO:

id name namespace
GO:0043604 amide biosynthetic process biological_process
GO:1901566 organonitrogen compound biosynthetic process biological_process
GO:0043043 peptide biosynthetic process biological_process
GO:0006412 translation biological_process
GO:0042246 tissue regeneration biological_process
GO:0006518 peptide metabolic process biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075351 False 1104 lncRNA 0.33 3 24033752 24035326
TCONS_00075352 True 1453 lncRNA 0.33 2 24033752 24035345

Neighbor

gene id symbol gene type direction distance location
XLOC_037826 rpe coding downstream 2291 24025444 ~ 24031461 (-)
XLOC_037825 col6a3 coding downstream 39527 23914317 ~ 23994225 (-)
XLOC_037824 CR545476.2 coding downstream 121747 23911891 ~ 23912005 (-)
XLOC_037823 NA coding downstream 123887 23908083 ~ 23909865 (-)
XLOC_037822 asb18 coding downstream 139360 23885441 ~ 23894392 (-)
XLOC_037828 ackr3a coding upstream 8435 24043780 ~ 24050257 (-)
XLOC_037829 tyw5 coding upstream 80930 24116275 ~ 24120855 (-)
XLOC_037830 NA coding upstream 134270 24169615 ~ 24186056 (-)
XLOC_037831 NA coding upstream 168835 24204180 ~ 24209083 (-)
XLOC_037832 nabp1a coding upstream 179315 24214660 ~ 24218367 (-)
XLOC_037815 NA non-coding downstream 333117 23697064 ~ 23700635 (-)
XLOC_037814 NA non-coding downstream 339180 23691258 ~ 23694572 (-)
XLOC_037813 CR392363.2 non-coding downstream 645677 23383414 ~ 23388075 (-)
XLOC_037835 CR538727.1 non-coding upstream 299818 24335163 ~ 24335279 (-)
XLOC_037836 BX571803.3 non-coding upstream 355542 24390887 ~ 24394382 (-)
XLOC_037837 BX571803.1 non-coding upstream 512534 24547879 ~ 24547996 (-)
XLOC_037838 NA non-coding upstream 525689 24561034 ~ 24902573 (-)

Expression


Co-expression Network