Gene
RNA
| Item | Value |
|---|---|
| gene id | G1879403 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 53161325 ~ 53161983 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: protein TANC2-like isoform X5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2149915 | True | 659 | lncRNA | 0.54 | 1 | 53161325 | 53161983 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502960 | lsm12 | coding | downstream | 148337 | 52991464 ~ 53012988 (-) |
| LOC118943905 | LOC106585398 | coding | downstream | 154290 | 53004821 ~ 53007360 (-) |
| LOC110503033 | LOC106589632 | coding | downstream | 300671 | 52825493 ~ 52860654 (-) |
| LOC110503032 | LOC106610511 | coding | downstream | 345319 | 52774656 ~ 52816006 (-) |
| trnag-ccc-6 | NA | coding | downstream | 394406 | 52766849 ~ 52766919 (-) |
| LOC118943906 | NA | coding | upstream | 99606 | 53261589 ~ 53391375 (-) |
| LOC118943833 | LOC106610613 | coding | upstream | 243236 | 53405219 ~ 53448095 (-) |
| LOC110502962 | LOC106610650 | coding | upstream | 344110 | 53506093 ~ 53514592 (-) |
| LOC110502963 | LOC106610657 | coding | upstream | 356000 | 53517983 ~ 53562034 (-) |
| LOC110502964 | LOC106610676 | coding | upstream | 403118 | 53565101 ~ 53571481 (-) |
| G1879402 | NA | non-coding | downstream | 67 | 53161006 ~ 53161258 (-) |
| G1879397 | NA | non-coding | downstream | 19992 | 53141122 ~ 53141333 (-) |
| G1879393 | NA | non-coding | downstream | 25351 | 53135724 ~ 53135974 (-) |
| G1879383 | NA | non-coding | downstream | 49857 | 53108234 ~ 53111468 (-) |
| G1879377 | NA | non-coding | downstream | 63425 | 53097219 ~ 53097900 (-) |
| G1879404 | NA | non-coding | upstream | 176 | 53162159 ~ 53162424 (-) |
| G1879405 | NA | non-coding | upstream | 692 | 53162675 ~ 53162928 (-) |
| G1879409 | NA | non-coding | upstream | 5438 | 53167421 ~ 53167691 (-) |
| G1879410 | NA | non-coding | upstream | 5804 | 53167787 ~ 53168020 (-) |
| G1879414 | NA | non-coding | upstream | 12819 | 53174802 ~ 53175014 (-) |
| G1878770 | NA | other | downstream | 517816 | 52643088 ~ 52643509 (-) |
| LOC110502957 | LOC106610540 | other | downstream | 845547 | 52271405 ~ 52315778 (-) |
| G1878324 | NA | other | downstream | 953698 | 52207428 ~ 52207627 (-) |
| G1878101 | NA | other | downstream | 1123575 | 52036596 ~ 52037750 (-) |
| G1878014 | NA | other | downstream | 1226281 | 51934724 ~ 51935044 (-) |
| G1879406 | NA | other | upstream | 1259 | 53163242 ~ 53164351 (-) |
| LOC110503036 | LOC106610742 | other | upstream | 905804 | 54039018 ~ 54073953 (-) |
| G1880780 | NA | other | upstream | 1082799 | 54244782 ~ 54246686 (-) |
| G1881414 | NA | other | upstream | 1840783 | 55002766 ~ 55003624 (-) |
| G1883219 | NA | other | upstream | 3444023 | 56606006 ~ 56610640 (-) |
