Gene
RNA
| Item | Value |
|---|---|
| gene id | G1879405 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 53162675 ~ 53162928 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2149917 | True | 254 | lncRNA | 0.57 | 1 | 53162675 | 53162928 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502960 | lsm12 | coding | downstream | 149687 | 52991464 ~ 53012988 (-) |
| LOC118943905 | LOC106585398 | coding | downstream | 155640 | 53004821 ~ 53007360 (-) |
| LOC110503033 | LOC106589632 | coding | downstream | 302021 | 52825493 ~ 52860654 (-) |
| LOC110503032 | LOC106610511 | coding | downstream | 346669 | 52774656 ~ 52816006 (-) |
| trnag-ccc-6 | NA | coding | downstream | 395756 | 52766849 ~ 52766919 (-) |
| LOC118943906 | NA | coding | upstream | 98661 | 53261589 ~ 53391375 (-) |
| LOC118943833 | LOC106610613 | coding | upstream | 242291 | 53405219 ~ 53448095 (-) |
| LOC110502962 | LOC106610650 | coding | upstream | 343165 | 53506093 ~ 53514592 (-) |
| LOC110502963 | LOC106610657 | coding | upstream | 355055 | 53517983 ~ 53562034 (-) |
| LOC110502964 | LOC106610676 | coding | upstream | 402173 | 53565101 ~ 53571481 (-) |
| G1879404 | NA | non-coding | downstream | 251 | 53162159 ~ 53162424 (-) |
| G1879403 | NA | non-coding | downstream | 692 | 53161325 ~ 53161983 (-) |
| G1879402 | NA | non-coding | downstream | 1417 | 53161006 ~ 53161258 (-) |
| G1879397 | NA | non-coding | downstream | 21342 | 53141122 ~ 53141333 (-) |
| G1879393 | NA | non-coding | downstream | 26701 | 53135724 ~ 53135974 (-) |
| G1879409 | NA | non-coding | upstream | 4493 | 53167421 ~ 53167691 (-) |
| G1879410 | NA | non-coding | upstream | 4859 | 53167787 ~ 53168020 (-) |
| G1879414 | NA | non-coding | upstream | 11874 | 53174802 ~ 53175014 (-) |
| G1879415 | NA | non-coding | upstream | 12287 | 53175215 ~ 53175439 (-) |
| G1879422 | NA | non-coding | upstream | 24220 | 53187148 ~ 53187368 (-) |
| G1878770 | NA | other | downstream | 519166 | 52643088 ~ 52643509 (-) |
| LOC110502957 | LOC106610540 | other | downstream | 846897 | 52271405 ~ 52315778 (-) |
| G1878324 | NA | other | downstream | 955048 | 52207428 ~ 52207627 (-) |
| G1878101 | NA | other | downstream | 1124925 | 52036596 ~ 52037750 (-) |
| G1878014 | NA | other | downstream | 1227631 | 51934724 ~ 51935044 (-) |
| G1879406 | NA | other | upstream | 314 | 53163242 ~ 53164351 (-) |
| LOC110503036 | LOC106610742 | other | upstream | 904859 | 54039018 ~ 54073953 (-) |
| G1880780 | NA | other | upstream | 1081854 | 54244782 ~ 54246686 (-) |
| G1881414 | NA | other | upstream | 1839838 | 55002766 ~ 55003624 (-) |
| G1883219 | NA | other | upstream | 3443078 | 56606006 ~ 56610640 (-) |
