Gene
RNA
| Item | Value |
|---|---|
| gene id | G1879415 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 53175215 ~ 53175439 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2149928 | True | 225 | lncRNA | 0.42 | 1 | 53175215 | 53175439 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502960 | lsm12 | coding | downstream | 162227 | 52991464 ~ 53012988 (-) |
| LOC118943905 | LOC106585398 | coding | downstream | 168180 | 53004821 ~ 53007360 (-) |
| LOC110503033 | LOC106589632 | coding | downstream | 314561 | 52825493 ~ 52860654 (-) |
| LOC110503032 | LOC106610511 | coding | downstream | 359209 | 52774656 ~ 52816006 (-) |
| trnag-ccc-6 | NA | coding | downstream | 408296 | 52766849 ~ 52766919 (-) |
| LOC118943906 | NA | coding | upstream | 86150 | 53261589 ~ 53391375 (-) |
| LOC118943833 | LOC106610613 | coding | upstream | 229780 | 53405219 ~ 53448095 (-) |
| LOC110502962 | LOC106610650 | coding | upstream | 330654 | 53506093 ~ 53514592 (-) |
| LOC110502963 | LOC106610657 | coding | upstream | 342544 | 53517983 ~ 53562034 (-) |
| LOC110502964 | LOC106610676 | coding | upstream | 389662 | 53565101 ~ 53571481 (-) |
| G1879414 | NA | non-coding | downstream | 201 | 53174802 ~ 53175014 (-) |
| G1879410 | NA | non-coding | downstream | 7195 | 53167787 ~ 53168020 (-) |
| G1879409 | NA | non-coding | downstream | 7524 | 53167421 ~ 53167691 (-) |
| G1879405 | NA | non-coding | downstream | 12287 | 53162675 ~ 53162928 (-) |
| G1879404 | NA | non-coding | downstream | 12791 | 53162159 ~ 53162424 (-) |
| G1879422 | NA | non-coding | upstream | 11709 | 53187148 ~ 53187368 (-) |
| G1879423 | NA | non-coding | upstream | 12561 | 53188000 ~ 53188417 (-) |
| G1879426 | NA | non-coding | upstream | 20294 | 53195733 ~ 53196272 (-) |
| G1879427 | NA | non-coding | upstream | 23728 | 53199167 ~ 53199411 (-) |
| G1879431 | NA | non-coding | upstream | 29948 | 53205387 ~ 53205630 (-) |
| G1879406 | NA | other | downstream | 10864 | 53163242 ~ 53164351 (-) |
| G1878770 | NA | other | downstream | 531706 | 52643088 ~ 52643509 (-) |
| LOC110502957 | LOC106610540 | other | downstream | 859437 | 52271405 ~ 52315778 (-) |
| G1878324 | NA | other | downstream | 967588 | 52207428 ~ 52207627 (-) |
| G1878101 | NA | other | downstream | 1137465 | 52036596 ~ 52037750 (-) |
| LOC110503036 | LOC106610742 | other | upstream | 892348 | 54039018 ~ 54073953 (-) |
| G1880780 | NA | other | upstream | 1069343 | 54244782 ~ 54246686 (-) |
| G1881414 | NA | other | upstream | 1827327 | 55002766 ~ 55003624 (-) |
| G1883219 | NA | other | upstream | 3430567 | 56606006 ~ 56610640 (-) |
| G1883244 | NA | other | upstream | 3468568 | 56644007 ~ 56709888 (-) |
