Gene
RNA
| Item | Value |
|---|---|
| gene id | G1879443 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 53215894 ~ 53216121 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2149961 | True | 228 | lncRNA | 0.48 | 1 | 53215894 | 53216121 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502960 | lsm12 | coding | downstream | 202906 | 52991464 ~ 53012988 (-) |
| LOC118943905 | LOC106585398 | coding | downstream | 208859 | 53004821 ~ 53007360 (-) |
| LOC110503033 | LOC106589632 | coding | downstream | 355240 | 52825493 ~ 52860654 (-) |
| LOC110503032 | LOC106610511 | coding | downstream | 399888 | 52774656 ~ 52816006 (-) |
| trnag-ccc-6 | NA | coding | downstream | 448975 | 52766849 ~ 52766919 (-) |
| LOC118943906 | NA | coding | upstream | 45468 | 53261589 ~ 53391375 (-) |
| LOC118943833 | LOC106610613 | coding | upstream | 189098 | 53405219 ~ 53448095 (-) |
| LOC110502962 | LOC106610650 | coding | upstream | 289972 | 53506093 ~ 53514592 (-) |
| LOC110502963 | LOC106610657 | coding | upstream | 301862 | 53517983 ~ 53562034 (-) |
| LOC110502964 | LOC106610676 | coding | upstream | 348980 | 53565101 ~ 53571481 (-) |
| G1879434 | NA | non-coding | downstream | 6903 | 53208714 ~ 53208991 (-) |
| G1879431 | NA | non-coding | downstream | 10264 | 53205387 ~ 53205630 (-) |
| G1879427 | NA | non-coding | downstream | 16483 | 53199167 ~ 53199411 (-) |
| G1879426 | NA | non-coding | downstream | 19622 | 53195733 ~ 53196272 (-) |
| G1879423 | NA | non-coding | downstream | 27477 | 53188000 ~ 53188417 (-) |
| G1879444 | NA | non-coding | upstream | 436 | 53216557 ~ 53217012 (-) |
| G1879447 | NA | non-coding | upstream | 4084 | 53220205 ~ 53220698 (-) |
| G1879448 | NA | non-coding | upstream | 4939 | 53221060 ~ 53221287 (-) |
| G1879453 | NA | non-coding | upstream | 14384 | 53230505 ~ 53230707 (-) |
| G1879561 | NA | non-coding | upstream | 145266 | 53361387 ~ 53361626 (-) |
| G1879406 | NA | other | downstream | 51543 | 53163242 ~ 53164351 (-) |
| G1878770 | NA | other | downstream | 572385 | 52643088 ~ 52643509 (-) |
| LOC110502957 | LOC106610540 | other | downstream | 900116 | 52271405 ~ 52315778 (-) |
| G1878324 | NA | other | downstream | 1008267 | 52207428 ~ 52207627 (-) |
| G1878101 | NA | other | downstream | 1178144 | 52036596 ~ 52037750 (-) |
| LOC110503036 | LOC106610742 | other | upstream | 851666 | 54039018 ~ 54073953 (-) |
| G1880780 | NA | other | upstream | 1028661 | 54244782 ~ 54246686 (-) |
| G1881414 | NA | other | upstream | 1786645 | 55002766 ~ 55003624 (-) |
| G1883219 | NA | other | upstream | 3389885 | 56606006 ~ 56610640 (-) |
| G1883244 | NA | other | upstream | 3427886 | 56644007 ~ 56709888 (-) |
