Gene
RNA
| Item | Value |
|---|---|
| gene id | G1879561 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 53361387 ~ 53361626 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2150080 | True | 240 | lncRNA | 0.28 | 1 | 53361387 | 53361626 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503130 | LOC106610487 | coding | downstream | 139273 | 53028393 ~ 53222114 (-) |
| LOC110502960 | lsm12 | coding | downstream | 348399 | 52991464 ~ 53012988 (-) |
| LOC118943905 | LOC106585398 | coding | downstream | 354352 | 53004821 ~ 53007360 (-) |
| LOC110503033 | LOC106589632 | coding | downstream | 500733 | 52825493 ~ 52860654 (-) |
| LOC110503032 | LOC106610511 | coding | downstream | 545381 | 52774656 ~ 52816006 (-) |
| LOC118943833 | LOC106610613 | coding | upstream | 43593 | 53405219 ~ 53448095 (-) |
| LOC110502962 | LOC106610650 | coding | upstream | 144467 | 53506093 ~ 53514592 (-) |
| LOC110502963 | LOC106610657 | coding | upstream | 156357 | 53517983 ~ 53562034 (-) |
| LOC110502964 | LOC106610676 | coding | upstream | 203475 | 53565101 ~ 53571481 (-) |
| LOC110502966 | phf10 | coding | upstream | 355362 | 53716988 ~ 53734620 (-) |
| G1879453 | NA | non-coding | downstream | 130680 | 53230505 ~ 53230707 (-) |
| G1879448 | NA | non-coding | downstream | 140100 | 53221060 ~ 53221287 (-) |
| G1879447 | NA | non-coding | downstream | 140689 | 53220205 ~ 53220698 (-) |
| G1879444 | NA | non-coding | downstream | 144375 | 53216557 ~ 53217012 (-) |
| G1879443 | NA | non-coding | downstream | 145266 | 53215894 ~ 53216121 (-) |
| G1879587 | NA | non-coding | upstream | 18269 | 53379895 ~ 53380149 (-) |
| G1879589 | NA | non-coding | upstream | 19392 | 53381018 ~ 53381230 (-) |
| G1879602 | NA | non-coding | upstream | 30373 | 53391999 ~ 53392237 (-) |
| G1879631 | NA | non-coding | upstream | 33255 | 53394881 ~ 53395164 (-) |
| G1879633 | NA | non-coding | upstream | 35417 | 53397043 ~ 53397439 (-) |
| G1879406 | NA | other | downstream | 197036 | 53163242 ~ 53164351 (-) |
| G1878770 | NA | other | downstream | 717878 | 52643088 ~ 52643509 (-) |
| LOC110502957 | LOC106610540 | other | downstream | 1045609 | 52271405 ~ 52315778 (-) |
| G1878324 | NA | other | downstream | 1153760 | 52207428 ~ 52207627 (-) |
| G1878101 | NA | other | downstream | 1323637 | 52036596 ~ 52037750 (-) |
| LOC110503036 | LOC106610742 | other | upstream | 706161 | 54039018 ~ 54073953 (-) |
| G1880780 | NA | other | upstream | 883156 | 54244782 ~ 54246686 (-) |
| G1881414 | NA | other | upstream | 1641140 | 55002766 ~ 55003624 (-) |
| G1883219 | NA | other | upstream | 3244380 | 56606006 ~ 56610640 (-) |
| G1883244 | NA | other | upstream | 3282381 | 56644007 ~ 56709888 (-) |
