Gene
RNA
| Item | Value |
|---|---|
| gene id | G1879654 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 53443285 ~ 53443598 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2150188 | True | 314 | lncRNA | 0.37 | 1 | 53443285 | 53443598 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943904 | NA | coding | upstream | 42988 | 53398184 ~ 53400297 (+) |
| LOC110502959 | LOC106610521 | coding | upstream | 669793 | 52767090 ~ 52773492 (+) |
| LOC110502958 | LOC106610530 | coding | upstream | 855397 | 52525574 ~ 52587888 (+) |
| LOC110503031 | LOC106583559 | coding | upstream | 1467174 | 51956172 ~ 52016294 (+) |
| LOC110502954 | LOC106610563 | coding | upstream | 1682332 | 51725830 ~ 51760953 (+) |
| LOC110502965 | dll1 | coding | downstream | 207713 | 53651311 ~ 53657432 (+) |
| LOC110502967 | psmb1 | coding | downstream | 307768 | 53751366 ~ 53753611 (+) |
| tbp | tbp | coding | downstream | 327757 | 53771355 ~ 53780114 (+) |
| LOC110502970 | LOC106610710 | coding | downstream | 340482 | 53784080 ~ 53792095 (+) |
| LOC110502971 | LOC106610715 | coding | downstream | 385693 | 53829291 ~ 53840691 (+) |
| G1879608 | NA | non-coding | upstream | 39005 | 53403927 ~ 53404280 (+) |
| G1879605 | NA | non-coding | upstream | 40120 | 53402429 ~ 53403165 (+) |
| G1879599 | NA | non-coding | upstream | 52169 | 53390900 ~ 53391116 (+) |
| G1879590 | NA | non-coding | upstream | 60829 | 53382110 ~ 53382456 (+) |
| G1879686 | NA | non-coding | downstream | 42854 | 53486452 ~ 53492000 (+) |
| G1879688 | NA | non-coding | downstream | 43793 | 53487391 ~ 53487918 (+) |
| G1879829 | NA | non-coding | downstream | 158098 | 53601696 ~ 53601899 (+) |
| G1879832 | NA | non-coding | downstream | 160907 | 53604505 ~ 53604715 (+) |
| G1879849 | NA | non-coding | downstream | 171346 | 53614944 ~ 53615377 (+) |
| G1879582 | NA | other | upstream | 65099 | 53377810 ~ 53378186 (+) |
| G1878894 | LOC106610502 | other | upstream | 582650 | 52857868 ~ 52860635 (+) |
| G1878893 | NA | other | upstream | 606651 | 52825488 ~ 52836634 (+) |
| G1878346 | LOC100136012 | other | upstream | 1217096 | 52225820 ~ 52226189 (+) |
| G1879958 | NA | other | downstream | 408073 | 53851671 ~ 53855730 (+) |
| G1881371 | NA | other | downstream | 1559184 | 55002782 ~ 55003672 (+) |
| G1882830 | NA | other | downstream | 3086197 | 56529795 ~ 56538483 (+) |
| G1882831 | NA | other | downstream | 3090019 | 56533617 ~ 56543256 (+) |
| LOC110503001 | LOC106611028 | other | downstream | 3229650 | 56613066 ~ 56727194 (+) |
