Gene
RNA
| Item | Value |
|---|---|
| gene id | G1879802 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 53580436 ~ 53580654 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2150348 | True | 219 | lncRNA | 0.36 | 1 | 53580436 | 53580654 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502964 | LOC106610676 | coding | downstream | 8955 | 53565101 ~ 53571481 (-) |
| LOC110502963 | LOC106610657 | coding | downstream | 18402 | 53517983 ~ 53562034 (-) |
| LOC110502962 | LOC106610650 | coding | downstream | 65844 | 53506093 ~ 53514592 (-) |
| LOC118943833 | LOC106610613 | coding | downstream | 132341 | 53405219 ~ 53448095 (-) |
| LOC118943906 | NA | coding | downstream | 189061 | 53261589 ~ 53391375 (-) |
| LOC110502966 | phf10 | coding | upstream | 136334 | 53716988 ~ 53734620 (-) |
| pdcd2 | pdcd2 | coding | upstream | 198613 | 53779267 ~ 53784082 (-) |
| ccsapb | LOC106610728 | coding | upstream | 267973 | 53848627 ~ 53851652 (-) |
| LOC100135949 | actc1 | coding | upstream | 271265 | 53851919 ~ 53855036 (-) |
| LOC110502973 | abcb10 | coding | upstream | 278065 | 53858719 ~ 53864562 (-) |
| G1879772 | NA | non-coding | downstream | 96225 | 53483756 ~ 53484211 (-) |
| G1879638 | NA | non-coding | downstream | 167259 | 53412978 ~ 53413177 (-) |
| G1879636 | NA | non-coding | downstream | 176082 | 53404048 ~ 53404354 (-) |
| G1879633 | NA | non-coding | downstream | 182997 | 53397043 ~ 53397439 (-) |
| G1879631 | NA | non-coding | downstream | 185272 | 53394881 ~ 53395164 (-) |
| G1879824 | NA | non-coding | upstream | 14239 | 53594893 ~ 53595125 (-) |
| G1879846 | NA | non-coding | upstream | 30412 | 53611066 ~ 53611507 (-) |
| G1879845 | NA | non-coding | upstream | 30990 | 53611644 ~ 53612247 (-) |
| G1879850 | NA | non-coding | upstream | 34229 | 53614883 ~ 53615342 (-) |
| G1880453 | NA | non-coding | upstream | 127125 | 53707779 ~ 53708772 (-) |
| G1879406 | NA | other | downstream | 416085 | 53163242 ~ 53164351 (-) |
| G1878770 | NA | other | downstream | 936927 | 52643088 ~ 52643509 (-) |
| LOC110502957 | LOC106610540 | other | downstream | 1264658 | 52271405 ~ 52315778 (-) |
| G1878324 | NA | other | downstream | 1372809 | 52207428 ~ 52207627 (-) |
| G1878101 | NA | other | downstream | 1542686 | 52036596 ~ 52037750 (-) |
| LOC110503036 | LOC106610742 | other | upstream | 487133 | 54039018 ~ 54073953 (-) |
| G1880780 | NA | other | upstream | 664128 | 54244782 ~ 54246686 (-) |
| G1881414 | NA | other | upstream | 1422112 | 55002766 ~ 55003624 (-) |
| G1883219 | NA | other | upstream | 3025352 | 56606006 ~ 56610640 (-) |
| G1883244 | NA | other | upstream | 3063353 | 56644007 ~ 56709888 (-) |
