Gene
RNA
| Item | Value |
|---|---|
| gene id | G1879832 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 53604505 ~ 53604715 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2150382 | True | 211 | lncRNA | 0.43 | 1 | 53604505 | 53604715 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943904 | NA | coding | upstream | 204208 | 53398184 ~ 53400297 (+) |
| LOC110502959 | LOC106610521 | coding | upstream | 831013 | 52767090 ~ 52773492 (+) |
| LOC110502958 | LOC106610530 | coding | upstream | 1016617 | 52525574 ~ 52587888 (+) |
| LOC110503031 | LOC106583559 | coding | upstream | 1628394 | 51956172 ~ 52016294 (+) |
| LOC110502954 | LOC106610563 | coding | upstream | 1843552 | 51725830 ~ 51760953 (+) |
| LOC110502965 | dll1 | coding | downstream | 46596 | 53651311 ~ 53657432 (+) |
| LOC110502967 | psmb1 | coding | downstream | 146651 | 53751366 ~ 53753611 (+) |
| tbp | tbp | coding | downstream | 166640 | 53771355 ~ 53780114 (+) |
| LOC110502970 | LOC106610710 | coding | downstream | 179365 | 53784080 ~ 53792095 (+) |
| LOC110502971 | LOC106610715 | coding | downstream | 224576 | 53829291 ~ 53840691 (+) |
| G1879829 | NA | non-coding | upstream | 2606 | 53601696 ~ 53601899 (+) |
| G1879686 | NA | non-coding | upstream | 112505 | 53486452 ~ 53492000 (+) |
| G1879688 | NA | non-coding | upstream | 116587 | 53487391 ~ 53487918 (+) |
| G1879654 | NA | non-coding | upstream | 160907 | 53443285 ~ 53443598 (+) |
| G1879608 | NA | non-coding | upstream | 200225 | 53403927 ~ 53404280 (+) |
| G1879849 | NA | non-coding | downstream | 10229 | 53614944 ~ 53615377 (+) |
| G1879856 | NA | non-coding | downstream | 20683 | 53625398 ~ 53625642 (+) |
| G1879876 | NA | non-coding | downstream | 36465 | 53641180 ~ 53705440 (+) |
| G1879896 | NA | non-coding | downstream | 61677 | 53666392 ~ 53666790 (+) |
| G1879928 | NA | non-coding | downstream | 110364 | 53715079 ~ 53715309 (+) |
| G1879582 | NA | other | upstream | 226319 | 53377810 ~ 53378186 (+) |
| G1878894 | LOC106610502 | other | upstream | 743870 | 52857868 ~ 52860635 (+) |
| G1878893 | NA | other | upstream | 767871 | 52825488 ~ 52836634 (+) |
| G1878346 | LOC100136012 | other | upstream | 1378316 | 52225820 ~ 52226189 (+) |
| G1879958 | NA | other | downstream | 246956 | 53851671 ~ 53855730 (+) |
| G1881371 | NA | other | downstream | 1398067 | 55002782 ~ 55003672 (+) |
| G1882830 | NA | other | downstream | 2925080 | 56529795 ~ 56538483 (+) |
| G1882831 | NA | other | downstream | 2928902 | 56533617 ~ 56543256 (+) |
| LOC110503001 | LOC106611028 | other | downstream | 3068533 | 56613066 ~ 56727194 (+) |
