Gene
RNA
| Item | Value |
|---|---|
| gene id | G1880453 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 53707779 ~ 53708772 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2151127 | True | 405 | lncRNA | 0.37 | 2 | 53707779 | 53708772 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502964 | LOC106610676 | coding | downstream | 136298 | 53565101 ~ 53571481 (-) |
| LOC110502963 | LOC106610657 | coding | downstream | 145745 | 53517983 ~ 53562034 (-) |
| LOC110502962 | LOC106610650 | coding | downstream | 193187 | 53506093 ~ 53514592 (-) |
| LOC118943833 | LOC106610613 | coding | downstream | 259684 | 53405219 ~ 53448095 (-) |
| LOC118943906 | NA | coding | downstream | 316404 | 53261589 ~ 53391375 (-) |
| LOC110502966 | phf10 | coding | upstream | 8216 | 53716988 ~ 53734620 (-) |
| pdcd2 | pdcd2 | coding | upstream | 70495 | 53779267 ~ 53784082 (-) |
| ccsapb | LOC106610728 | coding | upstream | 139855 | 53848627 ~ 53851652 (-) |
| LOC100135949 | actc1 | coding | upstream | 143147 | 53851919 ~ 53855036 (-) |
| LOC110502973 | abcb10 | coding | upstream | 149947 | 53858719 ~ 53864562 (-) |
| G1879850 | NA | non-coding | downstream | 92437 | 53614883 ~ 53615342 (-) |
| G1879845 | NA | non-coding | downstream | 95532 | 53611644 ~ 53612247 (-) |
| G1879846 | NA | non-coding | downstream | 96272 | 53611066 ~ 53611507 (-) |
| G1879824 | NA | non-coding | downstream | 112654 | 53594893 ~ 53595125 (-) |
| G1879802 | NA | non-coding | downstream | 127125 | 53580436 ~ 53580654 (-) |
| G1880458 | NA | non-coding | upstream | 6962 | 53715734 ~ 53716014 (-) |
| G1880468 | NA | non-coding | upstream | 31207 | 53739979 ~ 53740229 (-) |
| G1880469 | NA | non-coding | upstream | 31941 | 53740713 ~ 53740981 (-) |
| G1880474 | NA | non-coding | upstream | 36004 | 53744776 ~ 53745006 (-) |
| G1880426 | psmb1 | non-coding | upstream | 42428 | 53751200 ~ 53753795 (-) |
| G1879406 | NA | other | downstream | 543428 | 53163242 ~ 53164351 (-) |
| G1878770 | NA | other | downstream | 1064270 | 52643088 ~ 52643509 (-) |
| LOC110502957 | LOC106610540 | other | downstream | 1392001 | 52271405 ~ 52315778 (-) |
| G1878324 | NA | other | downstream | 1500152 | 52207428 ~ 52207627 (-) |
| G1878101 | NA | other | downstream | 1670029 | 52036596 ~ 52037750 (-) |
| LOC110503036 | LOC106610742 | other | upstream | 359015 | 54039018 ~ 54073953 (-) |
| G1880780 | NA | other | upstream | 536010 | 54244782 ~ 54246686 (-) |
| G1881414 | NA | other | upstream | 1293994 | 55002766 ~ 55003624 (-) |
| G1883219 | NA | other | upstream | 2897234 | 56606006 ~ 56610640 (-) |
| G1883244 | NA | other | upstream | 2935235 | 56644007 ~ 56709888 (-) |
