Gene
RNA
| Item | Value |
|---|---|
| gene id | G1879928 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 53715079 ~ 53715309 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2150491 | True | 231 | lncRNA | 0.42 | 1 | 53715079 | 53715309 |
53,714,000
53,714,400
53,714,800
53,715,200
53,715,600
53,716,000
53,716,400
53,716,800
53,717,200
53,717,600
53,718,000
NC_048587.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502965 | dll1 | coding | upstream | 57647 | 53651311 ~ 53657432 (+) |
| LOC118943904 | NA | coding | upstream | 314782 | 53398184 ~ 53400297 (+) |
| LOC110502959 | LOC106610521 | coding | upstream | 941587 | 52767090 ~ 52773492 (+) |
| LOC110502958 | LOC106610530 | coding | upstream | 1127191 | 52525574 ~ 52587888 (+) |
| LOC110503031 | LOC106583559 | coding | upstream | 1738968 | 51956172 ~ 52016294 (+) |
| LOC110502967 | psmb1 | coding | downstream | 36057 | 53751366 ~ 53753611 (+) |
| tbp | tbp | coding | downstream | 56046 | 53771355 ~ 53780114 (+) |
| LOC110502970 | LOC106610710 | coding | downstream | 68771 | 53784080 ~ 53792095 (+) |
| LOC110502971 | LOC106610715 | coding | downstream | 113982 | 53829291 ~ 53840691 (+) |
| LOC110503035 | urb2 | coding | downstream | 153386 | 53868695 ~ 53893092 (+) |
| G1879876 | NA | non-coding | upstream | 9639 | 53641180 ~ 53705440 (+) |
| G1879896 | NA | non-coding | upstream | 48289 | 53666392 ~ 53666790 (+) |
| G1879856 | NA | non-coding | upstream | 89437 | 53625398 ~ 53625642 (+) |
| G1879849 | NA | non-coding | upstream | 99702 | 53614944 ~ 53615377 (+) |
| G1879832 | NA | non-coding | upstream | 110364 | 53604505 ~ 53604715 (+) |
| G1879929 | NA | non-coding | downstream | 6170 | 53721479 ~ 53724168 (+) |
| G1879935 | phf10 | non-coding | downstream | 11941 | 53727250 ~ 53734631 (+) |
| G1879945 | NA | non-coding | downstream | 28834 | 53744143 ~ 53744584 (+) |
| G1879956 | NA | non-coding | downstream | 40693 | 53756002 ~ 53756242 (+) |
| G1879968 | NA | non-coding | downstream | 48145 | 53763454 ~ 53763655 (+) |
| G1879582 | NA | other | upstream | 336893 | 53377810 ~ 53378186 (+) |
| G1878894 | LOC106610502 | other | upstream | 854444 | 52857868 ~ 52860635 (+) |
| G1878893 | NA | other | upstream | 878445 | 52825488 ~ 52836634 (+) |
| G1878346 | LOC100136012 | other | upstream | 1488890 | 52225820 ~ 52226189 (+) |
| G1879958 | NA | other | downstream | 136362 | 53851671 ~ 53855730 (+) |
| G1881371 | NA | other | downstream | 1287473 | 55002782 ~ 55003672 (+) |
| G1882830 | NA | other | downstream | 2814486 | 56529795 ~ 56538483 (+) |
| G1882831 | NA | other | downstream | 2818308 | 56533617 ~ 56543256 (+) |
| LOC110503001 | LOC106611028 | other | downstream | 2957939 | 56613066 ~ 56727194 (+) |
