Gene
RNA
| Item | Value |
|---|---|
| gene id | G1880458 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 53715734 ~ 53716014 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2151136 | True | 281 | lncRNA | 0.37 | 1 | 53715734 | 53716014 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502964 | LOC106610676 | coding | downstream | 144253 | 53565101 ~ 53571481 (-) |
| LOC110502963 | LOC106610657 | coding | downstream | 153700 | 53517983 ~ 53562034 (-) |
| LOC110502962 | LOC106610650 | coding | downstream | 201142 | 53506093 ~ 53514592 (-) |
| LOC118943833 | LOC106610613 | coding | downstream | 267639 | 53405219 ~ 53448095 (-) |
| LOC118943906 | NA | coding | downstream | 324359 | 53261589 ~ 53391375 (-) |
| LOC110502966 | phf10 | coding | upstream | 974 | 53716988 ~ 53734620 (-) |
| pdcd2 | pdcd2 | coding | upstream | 63253 | 53779267 ~ 53784082 (-) |
| ccsapb | LOC106610728 | coding | upstream | 132613 | 53848627 ~ 53851652 (-) |
| LOC100135949 | actc1 | coding | upstream | 135905 | 53851919 ~ 53855036 (-) |
| LOC110502973 | abcb10 | coding | upstream | 142705 | 53858719 ~ 53864562 (-) |
| G1880453 | NA | non-coding | downstream | 6962 | 53707779 ~ 53708772 (-) |
| G1879850 | NA | non-coding | downstream | 100392 | 53614883 ~ 53615342 (-) |
| G1879845 | NA | non-coding | downstream | 103487 | 53611644 ~ 53612247 (-) |
| G1879846 | NA | non-coding | downstream | 104227 | 53611066 ~ 53611507 (-) |
| G1879824 | NA | non-coding | downstream | 120609 | 53594893 ~ 53595125 (-) |
| G1880468 | NA | non-coding | upstream | 23965 | 53739979 ~ 53740229 (-) |
| G1880469 | NA | non-coding | upstream | 24699 | 53740713 ~ 53740981 (-) |
| G1880474 | NA | non-coding | upstream | 28762 | 53744776 ~ 53745006 (-) |
| G1880426 | psmb1 | non-coding | upstream | 35186 | 53751200 ~ 53753795 (-) |
| G1880477 | NA | non-coding | upstream | 39204 | 53755218 ~ 53755460 (-) |
| G1879406 | NA | other | downstream | 551383 | 53163242 ~ 53164351 (-) |
| G1878770 | NA | other | downstream | 1072225 | 52643088 ~ 52643509 (-) |
| LOC110502957 | LOC106610540 | other | downstream | 1399956 | 52271405 ~ 52315778 (-) |
| G1878324 | NA | other | downstream | 1508107 | 52207428 ~ 52207627 (-) |
| G1878101 | NA | other | downstream | 1677984 | 52036596 ~ 52037750 (-) |
| LOC110503036 | LOC106610742 | other | upstream | 351773 | 54039018 ~ 54073953 (-) |
| G1880780 | NA | other | upstream | 528768 | 54244782 ~ 54246686 (-) |
| G1881414 | NA | other | upstream | 1286752 | 55002766 ~ 55003624 (-) |
| G1883219 | NA | other | upstream | 2889992 | 56606006 ~ 56610640 (-) |
| G1883244 | NA | other | upstream | 2927993 | 56644007 ~ 56709888 (-) |
