Gene
RNA
| Item | Value |
|---|---|
| gene id | G1880489 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 53770185 ~ 53770424 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2151168 | True | 240 | lncRNA | 0.37 | 1 | 53770185 | 53770424 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502966 | phf10 | coding | downstream | 35565 | 53716988 ~ 53734620 (-) |
| LOC110502964 | LOC106610676 | coding | downstream | 198704 | 53565101 ~ 53571481 (-) |
| LOC110502963 | LOC106610657 | coding | downstream | 208151 | 53517983 ~ 53562034 (-) |
| LOC110502962 | LOC106610650 | coding | downstream | 255593 | 53506093 ~ 53514592 (-) |
| LOC118943833 | LOC106610613 | coding | downstream | 322090 | 53405219 ~ 53448095 (-) |
| pdcd2 | pdcd2 | coding | upstream | 8843 | 53779267 ~ 53784082 (-) |
| ccsapb | LOC106610728 | coding | upstream | 78203 | 53848627 ~ 53851652 (-) |
| LOC100135949 | actc1 | coding | upstream | 81495 | 53851919 ~ 53855036 (-) |
| LOC110502973 | abcb10 | coding | upstream | 88295 | 53858719 ~ 53864562 (-) |
| LOC110503036 | LOC106610742 | coding | upstream | 268594 | 54039018 ~ 54073953 (-) |
| G1880488 | NA | non-coding | downstream | 298 | 53769688 ~ 53769887 (-) |
| G1880487 | NA | non-coding | downstream | 526 | 53769050 ~ 53769659 (-) |
| G1880485 | NA | non-coding | downstream | 2997 | 53766988 ~ 53767188 (-) |
| G1880479 | NA | non-coding | downstream | 13169 | 53756719 ~ 53757016 (-) |
| G1880477 | NA | non-coding | downstream | 14725 | 53755218 ~ 53755460 (-) |
| G1880495 | NA | non-coding | upstream | 19818 | 53790242 ~ 53792067 (-) |
| G1880499 | NA | non-coding | upstream | 23164 | 53793588 ~ 53794153 (-) |
| G1880500 | NA | non-coding | upstream | 24796 | 53795220 ~ 53795432 (-) |
| G1880501 | NA | non-coding | upstream | 25146 | 53795570 ~ 53795856 (-) |
| G1880506 | NA | non-coding | upstream | 31824 | 53802248 ~ 53804847 (-) |
| G1879406 | NA | other | downstream | 605834 | 53163242 ~ 53164351 (-) |
| G1878770 | NA | other | downstream | 1126676 | 52643088 ~ 52643509 (-) |
| LOC110502957 | LOC106610540 | other | downstream | 1454407 | 52271405 ~ 52315778 (-) |
| G1878324 | NA | other | downstream | 1562558 | 52207428 ~ 52207627 (-) |
| G1878101 | NA | other | downstream | 1732435 | 52036596 ~ 52037750 (-) |
| G1880780 | NA | other | upstream | 474358 | 54244782 ~ 54246686 (-) |
| G1881414 | NA | other | upstream | 1232342 | 55002766 ~ 55003624 (-) |
| G1883219 | NA | other | upstream | 2835582 | 56606006 ~ 56610640 (-) |
| G1883244 | NA | other | upstream | 2873583 | 56644007 ~ 56709888 (-) |
