Gene
RNA
| Item | Value |
|---|---|
| gene id | G1879977 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 53797269 ~ 53797575 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2150557 | True | 307 | lncRNA | 0.45 | 1 | 53797269 | 53797575 |
53,794,800
53,795,200
53,795,600
53,796,000
53,796,400
53,796,800
53,797,200
53,797,200
53,797,600
53,798,000
53,798,400
53,798,800
53,799,200
NC_048587.1
Loading
Loading
Loading
Loading
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502970 | LOC106610710 | coding | upstream | 5174 | 53784080 ~ 53792095 (+) |
| tbp | tbp | coding | upstream | 17155 | 53771355 ~ 53780114 (+) |
| LOC110502967 | psmb1 | coding | upstream | 43658 | 53751366 ~ 53753611 (+) |
| LOC110502965 | dll1 | coding | upstream | 139837 | 53651311 ~ 53657432 (+) |
| LOC118943904 | NA | coding | upstream | 396972 | 53398184 ~ 53400297 (+) |
| LOC110502971 | LOC106610715 | coding | downstream | 31716 | 53829291 ~ 53840691 (+) |
| LOC110503035 | urb2 | coding | downstream | 71120 | 53868695 ~ 53893092 (+) |
| LOC110502975 | galt2 | coding | downstream | 104866 | 53902441 ~ 54027929 (+) |
| LOC110502976 | LOC106610750 | coding | downstream | 276781 | 54074356 ~ 54097821 (+) |
| LOC110503037 | LOC106610766 | coding | downstream | 316138 | 54113713 ~ 54190405 (+) |
| G1879969 | NA | non-coding | upstream | 32556 | 53764401 ~ 53764713 (+) |
| G1879968 | NA | non-coding | upstream | 33614 | 53763454 ~ 53763655 (+) |
| G1879956 | NA | non-coding | upstream | 41027 | 53756002 ~ 53756242 (+) |
| G1879945 | NA | non-coding | upstream | 52685 | 53744143 ~ 53744584 (+) |
| G1879935 | phf10 | non-coding | upstream | 62638 | 53727250 ~ 53734631 (+) |
| G1879980 | NA | non-coding | downstream | 3462 | 53801037 ~ 53804872 (+) |
| G1879983 | NA | non-coding | downstream | 11985 | 53809560 ~ 53809896 (+) |
| G1879998 | NA | non-coding | downstream | 27483 | 53825058 ~ 53825364 (+) |
| G1880009 | NA | non-coding | downstream | 44401 | 53841976 ~ 53843302 (+) |
| G1880002 | NA | non-coding | downstream | 46658 | 53844233 ~ 53847002 (+) |
| G1879582 | NA | other | upstream | 419083 | 53377810 ~ 53378186 (+) |
| G1878894 | LOC106610502 | other | upstream | 936634 | 52857868 ~ 52860635 (+) |
| G1878893 | NA | other | upstream | 960635 | 52825488 ~ 52836634 (+) |
| G1878346 | LOC100136012 | other | upstream | 1571080 | 52225820 ~ 52226189 (+) |
| G1879958 | NA | other | downstream | 54096 | 53851671 ~ 53855730 (+) |
| G1881371 | NA | other | downstream | 1205207 | 55002782 ~ 55003672 (+) |
| G1882830 | NA | other | downstream | 2732220 | 56529795 ~ 56538483 (+) |
| G1882831 | NA | other | downstream | 2736042 | 56533617 ~ 56543256 (+) |
| LOC110503001 | LOC106611028 | other | downstream | 2875673 | 56613066 ~ 56727194 (+) |
